数字微流控生物芯片引脚分配与液滴路径协同优化的启发式方法

R. Mukherjee, H. Rahaman, I. Banerjee, T. Samanta, P. Dasgupta
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引用次数: 11

摘要

数字微流控生物芯片的设计自动化在当今临床诊断过程中具有重要意义。在本文中,我们试图建立一个启发式算法,同时执行液滴路由和电极驱动。所提出的方法能够在优化的路由完成时间内以最小的电极使用量执行液滴路由,以及(ii)在成功液滴运输的路由路径上分配最小数量的控制引脚。所提出的方法是一种协同优化技术,它找到液滴源和目标对之间可能的最短路径,并以最优方式分配控制引脚来驱动路由路径。为了避免多个液滴之间不必要的混合,还对多个液滴的相交区域进行了有效的pin分配。该方法在各种基准测试和随机测试集上进行了测试,实验结果令人鼓舞。
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A Heuristic Method for Co-optimization of Pin Assignment and Droplet Routing in Digital Microfluidic Biochip
Design automation in Digital micro fluidic biochip is of immense importance in to days clinical diagnosis process. In this paper, we try to build a heuristic algorithm to simultaneously perform droplet routing and electrode actuation. The proposed method is capable of performing (i) droplet routing with minimal electrode usages in optimized routing completion time, and (ii) minimal number of control pin assignment on the routing path for successful droplet transportation. The proposed method is a co-optimization technique that finds the possible shortest path between the source and the target pair for a droplet and assigns control pins in an optimal manner to actuate the routing path. Intersection regions for multiple droplets are also assigned with pins in an efficient manner to avoid unnecessary mixing between several droplets. The proposed method is tested on various benchmarks and random test sets, and experimental results are quite encouraging.
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