Sunil Kumar Gaire, C. Zhang, Hongyu Li, Peizhou Huang, R. Liu, Haifeng Wang, D. Liang, L. Ying
{"title":"使用盲稀疏着色加速3D定位显微镜","authors":"Sunil Kumar Gaire, C. Zhang, Hongyu Li, Peizhou Huang, R. Liu, Haifeng Wang, D. Liang, L. Ying","doi":"10.1109/ISBI.2019.8759209","DOIUrl":null,"url":null,"abstract":"Single-molecule-localization based super-resolution microscopy has enabled the imaging of microscopic objects beyond the diffraction limit. However, these techniques are limited by the requirements of an extremely large number of frames for imaging of cell structures, thus having longer acquisition time. Here, we present a computational algorithm to accelerate 3D single-molecule localization microscopy technique by using blind sparse inpainting. This technique reconstructs the high-density super-resolution 3D images from low-density ones, maintaining similar structures as those of high-density images. The low-density images are generated using fewer frames than usually needed by the high-density images, thus requiring shorter acquisition time. Thus, the algorithm will accelerate 3D single-molecule imaging. The experimental 3D image reconstruction of microtubules using a reduced number of frames is presented to validate the concept.","PeriodicalId":119935,"journal":{"name":"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)","volume":"9 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2019-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":"{\"title\":\"Accelerated 3D Localization Microscopy Using Blind Sparse Inpainting\",\"authors\":\"Sunil Kumar Gaire, C. Zhang, Hongyu Li, Peizhou Huang, R. Liu, Haifeng Wang, D. Liang, L. Ying\",\"doi\":\"10.1109/ISBI.2019.8759209\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Single-molecule-localization based super-resolution microscopy has enabled the imaging of microscopic objects beyond the diffraction limit. However, these techniques are limited by the requirements of an extremely large number of frames for imaging of cell structures, thus having longer acquisition time. Here, we present a computational algorithm to accelerate 3D single-molecule localization microscopy technique by using blind sparse inpainting. This technique reconstructs the high-density super-resolution 3D images from low-density ones, maintaining similar structures as those of high-density images. The low-density images are generated using fewer frames than usually needed by the high-density images, thus requiring shorter acquisition time. Thus, the algorithm will accelerate 3D single-molecule imaging. The experimental 3D image reconstruction of microtubules using a reduced number of frames is presented to validate the concept.\",\"PeriodicalId\":119935,\"journal\":{\"name\":\"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)\",\"volume\":\"9 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2019-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"2\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/ISBI.2019.8759209\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ISBI.2019.8759209","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Accelerated 3D Localization Microscopy Using Blind Sparse Inpainting
Single-molecule-localization based super-resolution microscopy has enabled the imaging of microscopic objects beyond the diffraction limit. However, these techniques are limited by the requirements of an extremely large number of frames for imaging of cell structures, thus having longer acquisition time. Here, we present a computational algorithm to accelerate 3D single-molecule localization microscopy technique by using blind sparse inpainting. This technique reconstructs the high-density super-resolution 3D images from low-density ones, maintaining similar structures as those of high-density images. The low-density images are generated using fewer frames than usually needed by the high-density images, thus requiring shorter acquisition time. Thus, the algorithm will accelerate 3D single-molecule imaging. The experimental 3D image reconstruction of microtubules using a reduced number of frames is presented to validate the concept.