非结构化网格CFD应用的性能建模与优化

W. Gropp, D. Kaushik, D. Keyes, Barry F. Smith
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引用次数: 71

摘要

本文描述了来自NASA的三维非结构化网格欧拉流代码的性能调优经验,我们已经在PETSc框架中重新实现了该代码,并将其移植到几个大型机器上,包括ASCI Red和Blue Pacific机器、SGI Origin、Cray T3E和Beowulf集群。对于稀疏问题(基于偏微分方程的典型科学和工程代码),代码达到了相当高的性能水平,并且可以扩展到数千个处理器。由于CPU速度和内存访问速率之间的差距正在扩大,因此从以内存为中心的角度(与传统的面向闪存的角度相反)分析代码,以了解其顺序和并行性能。性能调优在三个方面进行:数据布局以增强引用的局域性、算法参数和并行编程模型。这项工作部分是由为稀疏矩阵-向量乘积运算开发的一些简单性能模型指导的。
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Performance Modeling and Tuning of an Unstructured Mesh CFD Application
This paper describes performance tuning experiences with a three-dimensional unstructured grid Euler flow code from NASA, which we have reimplemented in the PETSc framework and ported to several large-scale machines, including the ASCI Red and Blue Pacific machines, the SGI Origin, the Cray T3E, and Beowulf clusters. The code achieves a respectable level of performance for sparse problems, typical of scientific and engineering codes based on partial differential equations, and scales well up to thousands of processors. Since the gap between CPU speed and memory access rate is widening, the code is analyzed from a memory-centric perspective (in contrast to traditional flop-orientation) to understand its sequential and parallel performance. Performance tuning is approached on three fronts: data layouts to enhance locality of reference, algorithmic parameters, and parallel programming model. This effort was guided partly by some simple performance models developed for the sparse matrix-vector product operation.
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