利用全相关发现临床化学参数的相关聚类

T. Ferenci, L. Kovács
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引用次数: 5

摘要

临床化学试验在医学诊断中应用广泛。医生通常通过将每个参数与参考区间进行比较,从单变量意义上解释它们,然而,它们的相关结构也可能很有趣,因为它可以揭示常见的生理或病理机制。这些参数的相关分析受到两个问题的阻碍:变量之间的关系有时是非线性的和未知的函数形式,并且这些变量的数量很高,使得使用经典工具是不可行的。本文提出了一种解决这两个问题的新方法。它使用一种基于信息论的全相关度量来量化临床化学变量之间的依赖关系,因为全相关可以检测变量之间的任何依赖关系,无论是非线性的还是非单调的,因此它对关系的实际性质完全不敏感。另一个优点是,它不仅可以量化变量对之间的相关性,还可以量化更大的变量组之间的相关性。在此基础上,提出了一种处理临床化学参数高维性的新方法。该方法在美国代表性公共卫生调查NHANES的真实数据库中实施和说明。
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Using total correlation to discover related clusters of clinical chemistry parameters
Clinical chemistry tests are widely used in medical diagnosis. Physicians typically interpret them in a univariate sense, by comparing each parameter to a reference interval, however, their correlation structure may also be interesting, as it can shed light on common physiologic or pathological mechanisms. The correlation analysis of such parameters is hindered by two problems: the relationships between the variables are sometimes non-linear and of unknown functional form, and the number of such variables is high, making the use of classical tools infeasible. This paper presents a novel approach to address both problems. It uses an information theory-based measure called total correlation to quantify the dependence between clinical chemistry variables, as total correlation can detect any dependence between the variables, non-linear or even non-monotone ones as well, hence it is completely insensitive to the actual nature of the relationship. Another advantage is that is can quantify dependence not only between pairs of variables, but between larger groups of variables as well. By the virtue of this fact, a novel approach is presented that can handle the high dimensionality of clinical chemistry parameters. The approach is implemented and illustrated on a real-life database from the representative US public health survey NHANES.
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