新型多巴胺D2受体拮抗剂(R)- n -[[1-(4-氟苄基)-2-吡咯烷基]甲基]-5-溴-2,3-二甲氧基苯甲酰胺NCQ 115盐酸盐一水合物的分子和晶体结构

Acta pharmaceutica Nordica Pub Date : 1992-01-01
I Csöregh, T Högberg
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引用次数: 0

摘要

用单晶x射线衍射分析确定了标题化合物的结构和绝对构型。空间群对称性为R21;单斜晶胞包含两个分子,其尺寸为a = 12.4291(8), b = 7.4511(5), c = 12.7854(7)埃和β = 102.295(7)度。苯酰胺部分的平面构象被分子内(N)H…O键。氢键将氯阴离子与质子化的吡咯烷N原子连接起来,也将结晶水与酰胺基的羰基氧连接起来。该分子具有折叠构象,其中吡咯烷环的n -氟苯取代基和苯酰胺部分的h键伪环以三明治状方式排列。在晶体中,分子间氢键通过氯阴离子和水合物分子连接药物分子,形成围绕双轴的无尽螺旋链。绝对构型是通过比较wrot值0.037和0.040确定的,wrot值使用所有测量到的2027个唯一的非零反射,并分别假设手性中心为R和S构型。对1512个I/delta(I)大于3的反射波进行结构模型的改进,最终指数R = 0.031, wR = 0.033。
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Molecular and crystal structure of the hydrochloride monohydrate of (R)-N-[[1-(4-fluorobenzyl)-2-pyrrolidinyl]methyl]-5-bromo-2,3- dimethoxybenzamide, NCQ 115, a novel dopamine D2 receptor antagonist.

The structure and absolute configuration of the title compound have been determined by single crystal X-ray diffraction analysis. The space group symmetry is R21; the monoclinic unit cell contains two molecules and has the dimensions a = 12.4291(8), b = 7.4511(5), c = 12.7854(7) angstroms and beta = 102.295(7) degrees. The planar conformation of the benzamide moiety is stabilized by an intramolecular (N)H...O bond. Hydrogen bonds connect the chloride anion to the protonated pyrrolidine N atom, and also the crystal water to the carbonyl oxygen of the amide group. The molecule has a folded conformation in which the N-fluorobenzyl substituent of the pyrrolidine ring and the H-bonded pseudo ring of the benzamide moiety are arranged in a sandwich-like manner. In the crystal, intermolecular hydrogen bonds link the drug molecules via the chloride anion and the hydrate molecule into endless helical chains around the twofold axis. The absolute configuration was determined by comparison of the wRtot values, 0.037 and 0.040, calculated using all measured 2027 unique, non-zero reflections and assuming R and S configuration for the chiral center, respectively. Refinement of the structural model with an R configuration resulted in the final indices of R = 0.031 and wR = 0.033 for 1512 reflections with I/delta(I) greater than 3.

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