志贺毒素细菌噬菌体rz/rz1基因的分析

Tessa Sjahriani, D. Arivo, E. Wasito, W. Tyasningsih
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摘要

噬菌体rz/rz1基因是噬菌体裂解破坏细菌宿主外膜所必需的膜亚基。由于它们倾向于切除和感染多个宿主,它们是水平基因转移的关键驱动因素,导致细菌成为产志贺毒素大肠杆菌。本研究旨在研究大肠杆菌STEC菌株和携带stx基因的sonneshigella的rz/rz1基因,获得8个裂解噬菌体,采用PCR、DNA测序和NCBI Blast、Expasy translation和Expasy protparam进行分析。rz/rz1基因序列与大肠杆菌STEC和索尼氏志贺氏菌的相似性为97.73% ~ 98.90%。经Kruskal-Wallis统计检验,噬菌体、大肠杆菌STEC和索内志贺氏菌的rz/rz1氨基酸含量差异有统计学意义(p < 0.001)。结论:裂解噬菌体rz/rz1基因参与了stx基因的传播,氨基酸差异显著。
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The Analysis of Phage rz/rz1 Gene in Shigatoxin Bacteria
The phage rz/rz1 gene is a membrane subunit that is required for phage lysis to breach the bacterial host's outer membrane. Because of their proclivity to excise and infect multiple hosts, they are key drivers of horizontal gene transfer resulting in the bacteria becoming a STEC. This study aim to looked at the rz/rz1 gene of E. coli strain STEC and Shigella sonnei carrying stx gene, yielded eight lytic bacteriophages, using PCR, DNA sequencing and NCBI Blast, Expasy translation and Expasy protparam for analyze. The rz/rz1 gene sequences were found to have 97.73 % to 98.90 % identical similarities with E. coli strain STEC and Shigella sonnei. According to the Kruskal-Wallis statistical test, there was a significant difference in rz/rz1 amino acid between Phage, E. coli strain STEC and Shigella sonnei (p < 0.001). The conclusion is the rz/rz1 gene of lytic bacteriophage was involved in the spread of stx gene, with significant difference of amino acid.
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