基于多变量优化算法的白血病基因表达谱分类

Yajie Liu, Xinling Shi, Changxing Gou, Baolei Li, Qinhu Zhang, Lv Danjv, Yunchao Huang
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引用次数: 0

摘要

基于基因表达谱的白血病样本分类已被证明是一种有效的方法。基于这一目的,大量的智能算法被开发出来。然而,在低、高基因维度上均表现稳定、准确的算法却很少。但是它们都不能保存优化的历史信息。本文提出了一种基于多变量优化算法(MOA)的分类算法。采用不同维度的白血病基因表达谱进行验证。采用粒子群优化算法(PSO)和双层粒子群优化算法(TLPSO)进行比较。该算法具有稳定且相对准确的分类性能,可作为一种有效的基因表达谱分类算法。
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Classification of leukemia gene expression profiles based on multivariant optimization algorithm
Classification of leukemia samples based on gene expression profiles has been proved an efficient way. Large numbers of intelligence algorithms have been exploited based on this purpose. However, few of them display stable and accurate performance for both low and high gene dimensionalities. Still none of them could keep the history information of optimization. Here, a classification algorithm based on the novel multivariant optimization algorithm (MOA) is proposed. Leukemia gene expression profiles with different dimensionalities are used for validation. The particle swarm optimization (PSO) and the two-layer particle swarm optimization (TLPSO) algorithm are used for comparison. The MOA shows stable and relatively accurate classification performance and could be used as an effective classification algorithm for gene expression profiles.
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