使用一种新的特征选择方法识别影响认知功能的相关弥散MRI指标

Tongda Xu, Xiyan Cai, Yao Wang, X. Wang, Sohae Chung, E. Fieremans, J. Rath, S. Flanagan, Y. Lui
{"title":"使用一种新的特征选择方法识别影响认知功能的相关弥散MRI指标","authors":"Tongda Xu, Xiyan Cai, Yao Wang, X. Wang, Sohae Chung, E. Fieremans, J. Rath, S. Flanagan, Y. Lui","doi":"10.1109/SPMB47826.2019.9037845","DOIUrl":null,"url":null,"abstract":"Mild Traumatic Brain Injury (mTBI) is a significant public health problem. The most troubling symptoms after mTBI are cognitive complaints. Studies show measurable differences between patients with mTBI and healthy controls with respect to tissue microstructure using diffusion MRI. However, it remains unclear which diffusion measures are the most informative with regard to cognitive functions in both the healthy state as well as after injury. In this study, we use diffusion MRI to formulate a predictive model for performance on working memory based on the most relevant MRI features. As exhaustive search is impractical, the key challenge is to identify relevant features over a large feature space with high accuracy within reasonable time-frame. To tackle this challenge, we propose a novel improvement of the best first search approach with crossover operators inspired by genetic algorithm. Compared against other heuristic feature selection algorithms, the proposed method achieves significantly more accurate predictions and yields clinically interpretable selected features (improvement of r2 in 8 of 9 cohorts and up to 0.08).","PeriodicalId":143197,"journal":{"name":"2019 IEEE Signal Processing in Medicine and Biology Symposium (SPMB)","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2019-08-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of Relevant Diffusion MRI Metrics Impacting Cognitive Functions Using a Novel Feature Selection Method\",\"authors\":\"Tongda Xu, Xiyan Cai, Yao Wang, X. Wang, Sohae Chung, E. Fieremans, J. Rath, S. Flanagan, Y. Lui\",\"doi\":\"10.1109/SPMB47826.2019.9037845\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Mild Traumatic Brain Injury (mTBI) is a significant public health problem. The most troubling symptoms after mTBI are cognitive complaints. Studies show measurable differences between patients with mTBI and healthy controls with respect to tissue microstructure using diffusion MRI. However, it remains unclear which diffusion measures are the most informative with regard to cognitive functions in both the healthy state as well as after injury. In this study, we use diffusion MRI to formulate a predictive model for performance on working memory based on the most relevant MRI features. As exhaustive search is impractical, the key challenge is to identify relevant features over a large feature space with high accuracy within reasonable time-frame. To tackle this challenge, we propose a novel improvement of the best first search approach with crossover operators inspired by genetic algorithm. Compared against other heuristic feature selection algorithms, the proposed method achieves significantly more accurate predictions and yields clinically interpretable selected features (improvement of r2 in 8 of 9 cohorts and up to 0.08).\",\"PeriodicalId\":143197,\"journal\":{\"name\":\"2019 IEEE Signal Processing in Medicine and Biology Symposium (SPMB)\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2019-08-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2019 IEEE Signal Processing in Medicine and Biology Symposium (SPMB)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/SPMB47826.2019.9037845\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2019 IEEE Signal Processing in Medicine and Biology Symposium (SPMB)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/SPMB47826.2019.9037845","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

轻度创伤性脑损伤(mTBI)是一个重大的公共卫生问题。mTBI后最令人不安的症状是认知障碍。研究表明,mTBI患者与健康对照者在弥散MRI的组织微观结构方面存在可测量的差异。然而,目前尚不清楚哪种扩散测量对健康状态和损伤后的认知功能最有帮助。在这项研究中,我们使用扩散MRI来建立一个基于最相关MRI特征的工作记忆性能预测模型。由于穷举搜索是不切实际的,关键的挑战是在合理的时间框架内以高精度识别大特征空间中的相关特征。为了解决这一挑战,我们提出了一种基于遗传算法的交叉算子的最佳首次搜索改进方法。与其他启发式特征选择算法相比,该方法实现了更准确的预测,并产生了临床可解释的选择特征(9个队列中有8个的r2提高,最高达0.08)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Identification of Relevant Diffusion MRI Metrics Impacting Cognitive Functions Using a Novel Feature Selection Method
Mild Traumatic Brain Injury (mTBI) is a significant public health problem. The most troubling symptoms after mTBI are cognitive complaints. Studies show measurable differences between patients with mTBI and healthy controls with respect to tissue microstructure using diffusion MRI. However, it remains unclear which diffusion measures are the most informative with regard to cognitive functions in both the healthy state as well as after injury. In this study, we use diffusion MRI to formulate a predictive model for performance on working memory based on the most relevant MRI features. As exhaustive search is impractical, the key challenge is to identify relevant features over a large feature space with high accuracy within reasonable time-frame. To tackle this challenge, we propose a novel improvement of the best first search approach with crossover operators inspired by genetic algorithm. Compared against other heuristic feature selection algorithms, the proposed method achieves significantly more accurate predictions and yields clinically interpretable selected features (improvement of r2 in 8 of 9 cohorts and up to 0.08).
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Spectrum Sharing Strategy for Radio Frequency-Based Medical Services Predicting Subjective Sleep Quality Using Recurrent Neural Networks Software and Data Resources to Advance Machine Learning Research in Electroencephalography SPMB 2019 Table of Contents Recent Advances in the Temple University Digital Pathology Corpus
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1