支持中低收入国家生物银行的发展

Tomas Klingstrom, Maimuna Mendy, D. Meunier, Anouk Berger, J. Reichel, A. Christoffels, Hocine Bendou, C. Swanepoel, Lemoene Smit, Campbell Mckellar-Basset, E. Bongcam-Rudloff, Jonas Soderberg, Roxana Merino-Martinez, Suyesh Amatya, A. Kihara, S. Kemp, Robert Reihs, Heimo Muller
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引用次数: 15

摘要

生物银行是一个有组织的生物材料和相关数据的集合。它们是生命科学研究的基础资源,有助于药物、诊断标志物的开发,并有助于更深入地了解调节地球上所有生命发育的遗传学。生物库在高收入国家(HIC)建立良好,在低收入和中等收入国家(LMIC)迅速兴起。对低收入和中等收入国家生物库的调查表明,与特定项目相关的有限资源和短期资金威胁到生物库的可持续性。针对艾滋病毒和疟疾等重大社会挑战的适合用途的生物库为将生物库与低收入和中等收入国家的现有研究界结合起来提供了良好的基础。但是为了在未来可持续发展,重要的是让生物银行成为当地研究团体的一个组成部分。为了实现这一目标,必须降低生物银行的运营成本,必须开发模板来支持当地的伦理委员会,并且必须让研究人员有机会积累成功运营基于生物银行的研究项目的经验。B3Africa联盟是基于这些结论建立起来的,它的建立是为了通过创建一个具有成本效益的实验室信息管理系统(LIMS)来支持基于生物库的研究,用于开发生物库,同时也为当地研究界的培训和能力建设做出贡献。这个名为eB3Kit的技术平台是开源的,由一个LIMS和一个基于eBiokit的生物信息学模块组成,研究人员可以控制自己的数据分析。除了技术平台,该联盟还将为相关基础设施提供培训和支持,以规范基于生物库的研究的伦理和法律影响。
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Supporting the development of biobanks in low and medium income countries
Biobanks are an organized collection of biological material and associated data. They are a fundamental resource for life science research and contribute to the development of pharmaceutical drugs, diagnostic markers and to a deeper understanding of the genetics that regulate the development of all life on earth. Biobanks are well established in High Income Countries (HIC) and are rapidly emerging in Low and Middle Income Countries (LMIC). Surveys among biobanks operating in a LMIC setting indicate that limited resources and short term funding tied to specific projects threaten the sustainability of the biobanks. Fit-for-purpose biobanks targeting major societal challenges such as HIV and Malaria provide an excellent basis for integrating biobanks with the available research communities in LMIC regions. But to become sustainable for the future it is important that biobanks become an integrated part of local research communities. To achieve this, the cost of operating biobanks must be lowered, templates must be developed to support local ethics committees and researchers must be given the opportunity to build experience in successfully operating biobank based research projects. The B3Africa consortium is based on these conclusions and set up to support biobank based research by creating a cost efficient Laboratory Information Management System (LIMS) for developing biobanks and also contribute to the training and capacity building in the local research community. The technical platform called the eB3Kit is open source and consists of a LIMS and a bioinformatics module based on the eBiokit that allow researchers to take control over the analysis of their own data. Along with the technical platform the consortium will also contribute training and support for the associated infrastructures necessary to regulate the ethical and legal implications of biobank based research.
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