三七皂苷抑制AKR1C3治疗肺癌有效成分的网络药理研究

IF 1.2 4区 医学 Q4 CHEMISTRY, MEDICINAL Letters in Drug Design & Discovery Pub Date : 2023-09-14 DOI:10.2174/1570180820666230914104206
Yue-zi Wei, Mei-zhu Yang, Wei Yuan
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引用次数: 0

摘要

背景:肺癌是诊断率第二高的恶性肿瘤,也是癌症相关死亡的主要原因。目的:通过网络药理学研究三七皂苷(PNS)抑制肺癌的潜在机制和分子靶点。方法:从TargetNet、SwissTargetPrediction和BatMan-TCM数据库中检索PNS各化合物的药效学靶点。其次,从Gene expression Omnibus (GEO)数据库中获取肺癌差异表达基因(DEGs),并通过R package进行筛选。随后,利用STRING 11.0数据库分析pns -肺癌共同靶点的蛋白-蛋白相互作用(PPI)网络,利用clusterProfiler进行基因本体(GO)标注,对共同靶点进行京都基因与基因组百科(KEGG)通路富集分析,利用Cytoscape 3.8.0构建并分析pns -肺癌共同靶点的“成分-靶点”网络。结果:通过数据库检索筛选,共获得PNS潜在药效学靶点154个,肺癌相关疾病药效学靶点2399个,PNS-肺癌常见靶点21个。21种常见靶点主要参与生物过程(如小分子代谢和细胞因子产生),是细胞结构(如神经元细胞体和膜筏)的主要组成部分。此外,这些靶点可能具有羧酸酯水解酶、G蛋白偶联胺受体和氧化还原酶的功能。主要富集于神经活性配体-受体相互作用、调节脂肪细胞脂解、钙信号通路等14条信号通路。此外,分子对接结果显示,醛酮还原酶家族1成员C3 (AKR1C3)和黑色素代谢酶(MME)可能是人参皂苷Rg1和三七皂苷R2的直接作用靶点。结论:我们的研究表明,人参皂苷通过多种靶点和途径抑制肺癌的进展。更重要的是,PNS可能通过直接抑制AKR1C3来治疗肺癌。
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Network Pharmacological Study of the Active Ingredient of Panax Notoginseng Saponins for the Treatment of Lung Cancer by Inhibiting AKR1C3
Background: Lung cancer is the malignancy with the second highest diagnostic rate and the leading cause of cancer-related death. Objective: This study aims to investigate the potential mechanism and molecular targets of Panax notoginseng saponins (PNS) in inhibiting lung cancer through network pharmacology. Methods: Pharmacodynamic targets of each compound of PNS were searched from TargetNet, SwissTargetPrediction, and BatMan-TCM databases. Next, the differential expression genes (DEGs) in lung cancer were obtained from the Gene Expression Omnibus (GEO) database and screened by R package. Later, the STRING 11.0 database was utilized to analyze the protein-protein interaction (PPI) network of common targets of PNS-lung cancer, clusterProfiler to perform gene ontology (GO) annotation, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis for the common targets, and Cytoscape 3.8.0 to construct and analyze the "ingredient-target" network for the common targets of PNS-lung cancer. Results: A total of 154 potential pharmacodynamic targets of PNS, 2399 DEGs of lung cancer-related diseases, and 21 common targets of PNS-lung cancer were obtained by database search and screening. The 21 common targets were mainly involved in biological processes (such as small molecule metabolism and cytokine production) and were major components of cellular structures (such as neuronal cell bodies and membrane rafts). Besides, these targets could function as carboxylic ester hydrolases, G protein-coupled amine receptors, and oxidoreductase. They were mainly enriched in 14 signaling pathways, like neuroactive ligand-receptor interaction, regulation of lipolysis in adipocytes, and calcium signaling pathway. Furthermore, the molecular docking results revealed that aldo-keto reductase family 1 member C3 (AKR1C3) and melanin metabolic enzyme (MME) may be direct targets of ginsenoside Rg1 and notoginsenoside R2. Conclusion: Our study showed that ginsenosides inhibit the progression of lung cancer through multiple targets and pathways. More importantly, PNS may treat lung cancer by directly inhibiting AKR1C3.
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来源期刊
CiteScore
1.80
自引率
10.00%
发文量
245
审稿时长
3 months
期刊介绍: Aims & Scope Letters in Drug Design & Discovery publishes letters, mini-reviews, highlights and guest edited thematic issues in all areas of rational drug design and discovery including medicinal chemistry, in-silico drug design, combinatorial chemistry, high-throughput screening, drug targets, and structure-activity relationships. The emphasis is on publishing quality papers very rapidly by taking full advantage of latest Internet technology for both submission and review of manuscripts. The online journal is an essential reading to all pharmaceutical scientists involved in research in drug design and discovery.
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