越南1例血流感染患者耐甲氧西林金黄色葡萄球菌BM85的分子特征

Hoang Dinh Phuc, Tran Thi Thanh Tam, Le Thi Thu Hang, Nguyen Thi Kieu Oanh, Vu Dang Hai Long, Kieu Duy Hung, Anne-Laure Bañuls, Nguyen Quang Huy
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摘要

耐甲氧西林金黄色葡萄球菌(MRSA)由于其对β-内酰胺类抗生素和许多其他抗生素类别的耐药性,通过内在和获得性机制发展,对全球健康构成威胁。在这项研究中,通过对越南巴赫迈医院一名血液感染患者分离的样本进行全基因组测序,研究了MRSA菌株BM85与抗生素耐药性相关的分子特征。还进行了抗生素敏感性试验,以确定抗生素耐药基因的存在与耐药表型之间的相关性。基因组分析表明,MRSA菌株BM85属于源自台湾的主要社区获得性(CA)-MRSA谱系ST59。该菌株携带葡萄球菌盒式染色体mec (SCCmec)型Vb (5C2&5)和pton - valentine白细胞杀死素(PVL)。此外,MRSA菌株BM85还具有多种耐药基因,包括tet38、tetK、blaZ、mecA、aph(3’)-IIIa、aacA-aphD和ermB,这些基因位于移动遗传元件MESPM1、Tn553-Tn4001转座子和携带tetK基因的质粒上,这些基因与四环素耐药有关。MRSA菌株BM85对青霉素、头孢西丁、庆大霉素、卡那霉素、妥布霉素、红霉素和四环素耐药,基因型耐药结果与表型耐药谱一致。MRSA菌株BM85的测序数据保存在GenBank, NCBI,登录号:BioProject PRJNA857185。总之,通过水平基因转移机制获得与抗生素耐药相关的外源遗传元件是多重耐药MRSA菌株BM85产生多重耐药的关键驱动因素。
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Molecular characterization of methicilin-resistant Staphylococcus aureus strain BM85 isolated from a Vietnamese patient with bloodstream infection
Methicillin-resistant Staphylococcus aureus (MRSA) is a threat to global health due to its resistance to β-lactam antibiotics and many other antibiotic classes developed via both intrinsic and acquired mechanisms. In this study, molecular characteristics related to antibiotic resistance of MRSA strain BM85 were investigated by whole-genome sequencing of a sample isolated from a patient with bloodstream infection at Bach Mai Hospital, Vietnam. Antibiotic susceptibility testing was also performed to determine the correlation between the presence of antibiotic-resistant genes and resistance phenotypes. Genomic analyses showed that the MRSA strain BM85 belonged to the major community-acquired (CA)-MRSA lineage ST59 originating from Taiwan. The strain harbored Staphylococcal Cassette Chromosome mec (SCCmec) type Vb (5C2&5) and Panton-Valentine leukocidin (PVL). Additionally, MRSA strain BM85 also possessed various antibiotic-resistant genes including tet38, tetK, blaZ, mecA, aph(3')-IIIa, aacA-aphD, and ermB which were located on mobile genetic elements MESPM1, Tn553-Tn4001 transposon, and a plasmid carrying the tetK gene, which was responsible for tetracycline resistance. The genotypic-resistant results were concordant with the phenotypic-resistant profile in which MRSA strain BM85 was resistant to penicillin, cefoxitin, gentamicin, kanamycin, tobramycin, erythromycin, and tetracycline. The sequencing data for the MRSA strain BM85 was deposited in GenBank, NCBI under accession number: BioProject PRJNA857185. In conclusion, the acquisition of the foreign genetic elements associated with antibiotic resistances through horizontal gene transfer mechanisms was the key driver of multidrug resistance in the multidrug-resistant MRSA strain BM85.
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