在基因型和表型之间是微生物组:共生与 "后基因组 "知识的形成。

IF 1.6 3区 哲学 Q1 HISTORY & PHILOSOPHY OF SCIENCE History and Philosophy of the Life Sciences Pub Date : 2023-12-06 DOI:10.1007/s40656-023-00599-y
Cécile Fasel, Luca Chiapperino
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引用次数: 0

摘要

撇开 "微生物组革命 "的强调不谈,研究肠道微生物组及其在生物体发育和进化中的作用是所谓后基因组学的一个核心特征;即当代生命科学在概念和/或实践上的转向,从遗传决定论和还原论出发,探索生物知识生产中的整体论、涌现论和复杂性。本文分析了一群特定的微生物组科学家如何创造关于黑腹果蝇发育共生的后基因组知识。本文从实用科学哲学和科学技术研究两方面入手,记录了在 "微生物组革命 "的日常生产劳动中出现的关于模型生物的人工制品性和代表性的认识论问题。具体来说,本文以一篇研究微生物群在苍蝇发育过程中的共生作用的研究论文的麻烦出版所涉及的所有书面和编辑交流为基础。这些书面材料让我们得以界定构成后基因组事实可能性条件的理由、证据、知识生产标准、对工具和研究设计的信任等网络。我们的结论是,对微生物群和共生关系进行后基因组研究,不仅仅是将生物体重构为一个完全新颖的多重反应基因组,还意味着要编造一个偏离后人类基因组计划生命科学社会技术实验系统脚本的故事。
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Between the genotype and the phenotype lies the microbiome: symbiosis and the making of 'postgenomic' knowledge.

Emphatic claims of a "microbiome revolution" aside, the study of the gut microbiota and its role in organismal development and evolution is a central feature of so-called postgenomics; namely, a conceptual and/or practical turn in contemporary life sciences, which departs from genetic determinism and reductionism to explore holism, emergentism and complexity in biological knowledge-production. This paper analyses the making of postgenomic knowledge about developmental symbiosis in Drosophila melanogaster by a specific group of microbiome scientists. Drawing from both practical philosophy of science and Science and Technology Studies, the paper documents epistemological questions of artefactuality and representativeness of model organisms as they emerge in the day-to-day labour producing and being produced by the "microbiome revolution." Specifically, the paper builds on all the written and editorial exchanges involved in the troubled publication of a research paper studying the symbiotic role of the microbiota in the flies' development. These written materials permit us to delimit the network of justifications, evidence, standards of knowledge-production, trust in the tools and research designs that make up the conditions of possibility of a postgenomic fact. More than reframing the organism as a radically novel multiplicity of reactive genomes, we conclude, doing postgenomic research on the microbiota and symbiosis means producing a story that deviates from the scripts embedded into the sociotechnical experimental systems of post-Human Genome Project life sciences.

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来源期刊
History and Philosophy of the Life Sciences
History and Philosophy of the Life Sciences 综合性期刊-科学史与科学哲学
CiteScore
2.60
自引率
5.00%
发文量
58
期刊介绍: History and Philosophy of the Life Sciences is an interdisciplinary journal committed to providing an integrative approach to understanding the life sciences. It welcomes submissions from historians, philosophers, biologists, physicians, ethicists and scholars in the social studies of science. Contributors are expected to offer broad and interdisciplinary perspectives on the development of biology, biomedicine and related fields, especially as these perspectives illuminate the foundations, development, and/or implications of scientific practices and related developments. Submissions which are collaborative and feature different disciplinary approaches are especially encouraged, as are submissions written by senior and junior scholars (including graduate students).
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