Mohammed Chekroun, Youssef Mourchid, Igor Bessières, Alain Lalande
{"title":"基于 EfficientNet 的深度学习在 0.35 T MR-Linac 放射治疗系统上对胸腔结构进行多器官分割","authors":"Mohammed Chekroun, Youssef Mourchid, Igor Bessières, Alain Lalande","doi":"10.3390/a16120564","DOIUrl":null,"url":null,"abstract":"The advent of the 0.35 T MR-Linac (MRIdian, ViewRay) system in radiation therapy allows precise tumor targeting for moving lesions. However, the lack of an automatic volume segmentation function in the MR-Linac’s treatment planning system poses a challenge. In this paper, we propose a deep-learning-based multiorgan segmentation approach for the thoracic region, using EfficientNet as the backbone for the network architecture. The objectives of this approach include accurate segmentation of critical organs, such as the left and right lungs, the heart, the spinal cord, and the esophagus, essential for minimizing radiation toxicity during external radiation therapy. Our proposed approach, when evaluated on an internal dataset comprising 81 patients, demonstrated superior performance compared to other state-of-the-art methods. Specifically, the results for our approach with a 2.5D strategy were as follows: a dice similarity coefficient (DSC) of 0.820 ± 0.041, an intersection over union (IoU) of 0.725 ± 0.052, and a 3D Hausdorff distance (HD) of 10.353 ± 4.974 mm. Notably, the 2.5D strategy surpassed the 2D strategy in all three metrics, exhibiting higher DSC and IoU values, as well as lower HD values. This improvement strongly suggests that our proposed approach with the 2.5D strategy may hold promise in achieving more precise and accurate segmentations when compared to the conventional 2D strategy. Our work has practical implications in the improvement of treatment planning precision, aligning with the evolution of medical imaging and innovative strategies for multiorgan segmentation tasks.","PeriodicalId":7636,"journal":{"name":"Algorithms","volume":"10 12","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2023-12-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Deep Learning Based on EfficientNet for Multiorgan Segmentation of Thoracic Structures on a 0.35 T MR-Linac Radiation Therapy System\",\"authors\":\"Mohammed Chekroun, Youssef Mourchid, Igor Bessières, Alain Lalande\",\"doi\":\"10.3390/a16120564\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"The advent of the 0.35 T MR-Linac (MRIdian, ViewRay) system in radiation therapy allows precise tumor targeting for moving lesions. However, the lack of an automatic volume segmentation function in the MR-Linac’s treatment planning system poses a challenge. In this paper, we propose a deep-learning-based multiorgan segmentation approach for the thoracic region, using EfficientNet as the backbone for the network architecture. The objectives of this approach include accurate segmentation of critical organs, such as the left and right lungs, the heart, the spinal cord, and the esophagus, essential for minimizing radiation toxicity during external radiation therapy. Our proposed approach, when evaluated on an internal dataset comprising 81 patients, demonstrated superior performance compared to other state-of-the-art methods. Specifically, the results for our approach with a 2.5D strategy were as follows: a dice similarity coefficient (DSC) of 0.820 ± 0.041, an intersection over union (IoU) of 0.725 ± 0.052, and a 3D Hausdorff distance (HD) of 10.353 ± 4.974 mm. Notably, the 2.5D strategy surpassed the 2D strategy in all three metrics, exhibiting higher DSC and IoU values, as well as lower HD values. This improvement strongly suggests that our proposed approach with the 2.5D strategy may hold promise in achieving more precise and accurate segmentations when compared to the conventional 2D strategy. Our work has practical implications in the improvement of treatment planning precision, aligning with the evolution of medical imaging and innovative strategies for multiorgan segmentation tasks.\",\"PeriodicalId\":7636,\"journal\":{\"name\":\"Algorithms\",\"volume\":\"10 12\",\"pages\":\"\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2023-12-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Algorithms\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.3390/a16120564\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Algorithms","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3390/a16120564","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, ARTIFICIAL INTELLIGENCE","Score":null,"Total":0}
Deep Learning Based on EfficientNet for Multiorgan Segmentation of Thoracic Structures on a 0.35 T MR-Linac Radiation Therapy System
The advent of the 0.35 T MR-Linac (MRIdian, ViewRay) system in radiation therapy allows precise tumor targeting for moving lesions. However, the lack of an automatic volume segmentation function in the MR-Linac’s treatment planning system poses a challenge. In this paper, we propose a deep-learning-based multiorgan segmentation approach for the thoracic region, using EfficientNet as the backbone for the network architecture. The objectives of this approach include accurate segmentation of critical organs, such as the left and right lungs, the heart, the spinal cord, and the esophagus, essential for minimizing radiation toxicity during external radiation therapy. Our proposed approach, when evaluated on an internal dataset comprising 81 patients, demonstrated superior performance compared to other state-of-the-art methods. Specifically, the results for our approach with a 2.5D strategy were as follows: a dice similarity coefficient (DSC) of 0.820 ± 0.041, an intersection over union (IoU) of 0.725 ± 0.052, and a 3D Hausdorff distance (HD) of 10.353 ± 4.974 mm. Notably, the 2.5D strategy surpassed the 2D strategy in all three metrics, exhibiting higher DSC and IoU values, as well as lower HD values. This improvement strongly suggests that our proposed approach with the 2.5D strategy may hold promise in achieving more precise and accurate segmentations when compared to the conventional 2D strategy. Our work has practical implications in the improvement of treatment planning precision, aligning with the evolution of medical imaging and innovative strategies for multiorgan segmentation tasks.