通过等温滴定量热法和分子对接研究四种生物碱与 HSA 之间相互作用的立体阻碍效应。

IF 2.3 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY Journal of Molecular Recognition Pub Date : 2024-01-08 DOI:10.1002/jmr.3075
Xinluan Lv, Wenjin Li, Miao Zhang, Ruiyong Wang, Junbiao Chang
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引用次数: 0

摘要

通过等温滴定量热法(ITC)、光谱学和分子对接技术研究了四种生物碱与人血清白蛋白(HSA)的结合。研究结果表明,茶碱或咖啡因可分别与 HAS 结合。研究获得了结合位点的数量和结合常数。结合模式为静态淬灭过程。立体阻碍、温度、盐浓度和缓冲溶液对结合的影响表明,茶碱和 HSA 的结合亲和力高于咖啡因。荧光和 ITC 结果表明,HSA 与茶碱或咖啡因的相互作用是一个熵驱动的自发放热过程。疏水力是主要的驱动因素。实验结果与分子对接数据一致。根据四种生物碱的分子结构,立体阻碍可能是 HSA 与这四种生物碱结合的主要因素。本研究阐明了四种生物碱与 HSA 的相互作用机制。
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Investigation of steric hindrance effect on the interactions between four alkaloids and HSA by isothermal titration calorimetry and molecular docking

The binding of four alkaloids with human serum albumin (HSA) was investigated by isothermal titration calorimetry (ITC), spectroscopy and molecular docking techniques. The findings demonstrated that theophylline or caffeine can bind to HAS, respectively. The number of binding sites and binding constants are obtained. The binding mode is a static quenching process. The effects of steric hindrance, temperature, salt concentration and buffer solution on the binding indicated that theophylline and HSA have higher binding affinity than caffeine. The fluorescence and ITC results showed that the interaction between HSA and theophylline or caffeine is an entropy-driven spontaneous exothermic process. The hydrophobic force was the primary driving factor. The experimental results were consistent with the molecular docking data. Based on the molecular structures of the four alkaloids, steric hindrance might be a major factor in the binding between HSA and these four alkaloids. This study elucidates the mechanism of interactions between four alkaloids and HSA.

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来源期刊
Journal of Molecular Recognition
Journal of Molecular Recognition 生物-生化与分子生物学
CiteScore
4.60
自引率
3.70%
发文量
68
审稿时长
2.7 months
期刊介绍: Journal of Molecular Recognition (JMR) publishes original research papers and reviews describing substantial advances in our understanding of molecular recognition phenomena in life sciences, covering all aspects from biochemistry, molecular biology, medicine, and biophysics. The research may employ experimental, theoretical and/or computational approaches. The focus of the journal is on recognition phenomena involving biomolecules and their biological / biochemical partners rather than on the recognition of metal ions or inorganic compounds. Molecular recognition involves non-covalent specific interactions between two or more biological molecules, molecular aggregates, cellular modules or organelles, as exemplified by receptor-ligand, antigen-antibody, nucleic acid-protein, sugar-lectin, to mention just a few of the possible interactions. The journal invites manuscripts that aim to achieve a complete description of molecular recognition mechanisms between well-characterized biomolecules in terms of structure, dynamics and biological activity. Such studies may help the future development of new drugs and vaccines, although the experimental testing of new drugs and vaccines falls outside the scope of the journal. Manuscripts that describe the application of standard approaches and techniques to design or model new molecular entities or to describe interactions between biomolecules, but do not provide new insights into molecular recognition processes will not be considered. Similarly, manuscripts involving biomolecules uncharacterized at the sequence level (e.g. calf thymus DNA) will not be considered.
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