Anna Ghidotti, A. Vitali, D. Regazzoni, Miri Weiss Cohen, C. Rizzi
{"title":"用于医学影像中膝关节自动分割的 CNN 架构比较分析:性能评估","authors":"Anna Ghidotti, A. Vitali, D. Regazzoni, Miri Weiss Cohen, C. Rizzi","doi":"10.1115/1.4064450","DOIUrl":null,"url":null,"abstract":"\n Segmentation of anatomical components is a major step in creating accurate and realistic 3D models of the human body, which are used in many clinical applications, including orthopedics. Recently, many deep learning approaches have been proposed to solve the problem of manual segmentation, that is time-consuming and operator-dependent. In the present study, SegResNet has been adapted from other domains, such as brain tumor, to segment knee bones from Magnetic Resonance images. This algorithm has been compared to the well-known U-Net in terms of evaluation metrics, such as Dice Similarity Coefficient and Hausdorff Distance. In the training phase, various combinations of hyper-parameters, such as epochs and learning rates, have been tested to determine which combination produced the most accurate results. Based on their comparable results, both U-Net and SegResNet performed well in accurately segmenting the femur. Dice Similarity Coefficients of 0.94 and Hausdorff Distances less than or equal to 1 mm indicate that both models are effective at capturing anatomical boundaries in the femur. According to the results of this study, SegResNet is a viable option for automating the creation of 3D femur models. In the future, the performance and applicability of SegResNet in real-world settings will be further validated and tested using a variety of datasets and clinical scenarios.","PeriodicalId":54856,"journal":{"name":"Journal of Computing and Information Science in Engineering","volume":"56 46","pages":""},"PeriodicalIF":2.6000,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Comparative Analysis of CNN Architectures for Automated Knee Segmentation in Medical Imaging: a Performance Evaluation\",\"authors\":\"Anna Ghidotti, A. Vitali, D. Regazzoni, Miri Weiss Cohen, C. Rizzi\",\"doi\":\"10.1115/1.4064450\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"\\n Segmentation of anatomical components is a major step in creating accurate and realistic 3D models of the human body, which are used in many clinical applications, including orthopedics. Recently, many deep learning approaches have been proposed to solve the problem of manual segmentation, that is time-consuming and operator-dependent. In the present study, SegResNet has been adapted from other domains, such as brain tumor, to segment knee bones from Magnetic Resonance images. This algorithm has been compared to the well-known U-Net in terms of evaluation metrics, such as Dice Similarity Coefficient and Hausdorff Distance. In the training phase, various combinations of hyper-parameters, such as epochs and learning rates, have been tested to determine which combination produced the most accurate results. Based on their comparable results, both U-Net and SegResNet performed well in accurately segmenting the femur. Dice Similarity Coefficients of 0.94 and Hausdorff Distances less than or equal to 1 mm indicate that both models are effective at capturing anatomical boundaries in the femur. According to the results of this study, SegResNet is a viable option for automating the creation of 3D femur models. In the future, the performance and applicability of SegResNet in real-world settings will be further validated and tested using a variety of datasets and clinical scenarios.\",\"PeriodicalId\":54856,\"journal\":{\"name\":\"Journal of Computing and Information Science in Engineering\",\"volume\":\"56 46\",\"pages\":\"\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2024-01-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Computing and Information Science in Engineering\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1115/1.4064450\",\"RegionNum\":3,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Computing and Information Science in Engineering","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1115/1.4064450","RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Comparative Analysis of CNN Architectures for Automated Knee Segmentation in Medical Imaging: a Performance Evaluation
Segmentation of anatomical components is a major step in creating accurate and realistic 3D models of the human body, which are used in many clinical applications, including orthopedics. Recently, many deep learning approaches have been proposed to solve the problem of manual segmentation, that is time-consuming and operator-dependent. In the present study, SegResNet has been adapted from other domains, such as brain tumor, to segment knee bones from Magnetic Resonance images. This algorithm has been compared to the well-known U-Net in terms of evaluation metrics, such as Dice Similarity Coefficient and Hausdorff Distance. In the training phase, various combinations of hyper-parameters, such as epochs and learning rates, have been tested to determine which combination produced the most accurate results. Based on their comparable results, both U-Net and SegResNet performed well in accurately segmenting the femur. Dice Similarity Coefficients of 0.94 and Hausdorff Distances less than or equal to 1 mm indicate that both models are effective at capturing anatomical boundaries in the femur. According to the results of this study, SegResNet is a viable option for automating the creation of 3D femur models. In the future, the performance and applicability of SegResNet in real-world settings will be further validated and tested using a variety of datasets and clinical scenarios.
期刊介绍:
The ASME Journal of Computing and Information Science in Engineering (JCISE) publishes articles related to Algorithms, Computational Methods, Computing Infrastructure, Computer-Interpretable Representations, Human-Computer Interfaces, Information Science, and/or System Architectures that aim to improve some aspect of product and system lifecycle (e.g., design, manufacturing, operation, maintenance, disposal, recycling etc.). Applications considered in JCISE manuscripts should be relevant to the mechanical engineering discipline. Papers can be focused on fundamental research leading to new methods, or adaptation of existing methods for new applications.
Scope: Advanced Computing Infrastructure; Artificial Intelligence; Big Data and Analytics; Collaborative Design; Computer Aided Design; Computer Aided Engineering; Computer Aided Manufacturing; Computational Foundations for Additive Manufacturing; Computational Foundations for Engineering Optimization; Computational Geometry; Computational Metrology; Computational Synthesis; Conceptual Design; Cybermanufacturing; Cyber Physical Security for Factories; Cyber Physical System Design and Operation; Data-Driven Engineering Applications; Engineering Informatics; Geometric Reasoning; GPU Computing for Design and Manufacturing; Human Computer Interfaces/Interactions; Industrial Internet of Things; Knowledge Engineering; Information Management; Inverse Methods for Engineering Applications; Machine Learning for Engineering Applications; Manufacturing Planning; Manufacturing Automation; Model-based Systems Engineering; Multiphysics Modeling and Simulation; Multiscale Modeling and Simulation; Multidisciplinary Optimization; Physics-Based Simulations; Process Modeling for Engineering Applications; Qualification, Verification and Validation of Computational Models; Symbolic Computing for Engineering Applications; Tolerance Modeling; Topology and Shape Optimization; Virtual and Augmented Reality Environments; Virtual Prototyping