探索一种新型的β-1,3-葡聚糖基转糖基化酶--MlGH17B,它来自海洋中的Muricauda lutaonensis菌株,可用于片状寡糖的修饰。

IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Glycobiology Pub Date : 2024-04-10 DOI:10.1093/glycob/cwae007
Leila Allahgholi, Maik G N Derks, Justyna M Dobruchowska, Andrius Jasilionis, Antoine Moenaert, Léonie Jouy, Kazi Zubaida Gulshan Ara, Javier A Linares-Pastén, Ólafur H Friðjónsson, Guðmundur Óli Hreggviðsson, Eva Nordberg Karlsson
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引用次数: 0

摘要

海洋环境蕴藏着丰富的可再生资源,例如含有独特多糖的大型藻类,这促使人们寻找海洋微生物中的酶来探索多糖转化的可能性。本研究对来自海洋细菌(Muricauda lutaonensis)的首个 GH17 葡糖基转糖基化酶 MlGH17B 进行了鉴定。该酶具有中度热稳定性,其Tm分别为64.4 °C和73.2 °C,但其最佳活性温度为20 °C,这表明该酶的活性位点相互作用对温度敏感。MlGH17B 使用聚合度(DP)为 4 或更高的β-1,3 层寡糖作为供体。供体的还原端会裂解出两个葡萄糖分子(结合在糖醛酸+1和+2亚位上),而剩余部分(结合在糖醛酸亚位上)则会转移到进入的β-1,3葡聚糖受体上,形成β-1,6连接,从而合成支链或扭结低聚糖。通过质谱分析检测到合成的低聚糖高达 DP26,表明发生了重复的转移反应,从而产生了多个 β-1,6-连接的分支。建模结构显示,该酶的活性位点由五个亚位点组成:三个糖酮(-3、-2 和 -1)亚位点和两个琼脂糖酮(+1 和 +2)亚位点,与 GH17 的唯一结晶 1,3-β- 葡糖基转移酶(来自堆肥茁壮成长真菌 Rhizomucor miehei 的 RmBgt17A)相比,底物相互作用有显著的保留,这表明尽管系统发育起源、生长环境和天然底物不同,但存在共同的催化机理。这两种酶都缺少植物中GH17内-β-葡聚糖酶中发现的延伸琼脂酮亚位的亚域,但细菌内葡聚糖酶(此处建模)中也缺少这种延伸,这表明这一特征并不能将转糖基化与水解区分开来,而可能与系统发育有关。
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Exploring a novel β-1,3-glucanosyltransglycosylase, MlGH17B, from a marine Muricauda lutaonensis strain for modification of laminari-oligosaccharides.

The marine environment, contains plentiful renewable resources, e.g. macroalgae with unique polysaccharides, motivating search for enzymes from marine microorganisms to explore conversion possibilities of the polysaccharides. In this study, the first GH17 glucanosyltransglycosylase, MlGH17B, from a marine bacterium (Muricauda lutaonensis), was characterized. The enzyme was moderately thermostable with Tm at 64.4 °C and 73.2 °C, but an activity optimum at 20 °C, indicating temperature sensitive active site interactions. MlGH17B uses β-1,3 laminari-oligosaccharides with a degree of polymerization (DP) of 4 or higher as donors. Two glucose moieties (bound in the aglycone +1 and +2 subsites) are cleaved off from the reducing end of the donor while the remaining part (bound in the glycone subsites) is transferred to an incoming β-1,3 glucan acceptor, making a β-1,6-linkage, thereby synthesizing branched or kinked oligosaccharides. Synthesized oligosaccharides up to DP26 were detected by mass spectrometry analysis, showing that repeated transfer reactions occurred, resulting in several β-1,6-linked branches. The modeled structure revealed an active site comprising five subsites: three glycone (-3, -2 and -1) and two aglycone (+1 and +2) subsites, with significant conservation of substrate interactions compared to the only crystallized 1,3-β-glucanosyltransferase from GH17 (RmBgt17A from the compost thriving fungus Rhizomucor miehei), suggesting a common catalytic mechanism, despite different phylogenetic origin, growth environment, and natural substrate. Both enzymes lacked the subdomain extending the aglycone subsites, found in GH17 endo-β-glucanases from plants, but this extension was also missing in bacterial endoglucanases (modeled here), showing that this feature does not distinguish transglycosylation from hydrolysis, but may rather relate to phylogeny.

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来源期刊
Glycobiology
Glycobiology 生物-生化与分子生物学
CiteScore
7.50
自引率
4.70%
发文量
73
审稿时长
3 months
期刊介绍: Established as the leading journal in the field, Glycobiology provides a unique forum dedicated to research into the biological functions of glycans, including glycoproteins, glycolipids, proteoglycans and free oligosaccharides, and on proteins that specifically interact with glycans (including lectins, glycosyltransferases, and glycosidases). Glycobiology is essential reading for researchers in biomedicine, basic science, and the biotechnology industries. By providing a single forum, the journal aims to improve communication between glycobiologists working in different disciplines and to increase the overall visibility of the field.
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