Ras 超家族 GTP 酶与草履虫的信号转导

IF 1.9 3区 生物学 Q4 MICROBIOLOGY Protist Pub Date : 2024-01-28 DOI:10.1016/j.protis.2024.126017
Mark C. Field
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引用次数: 0

摘要

生物的复杂性很难界定,但可以通过一个或多个特征来考虑,包括基因组的整体大小、基因数量、形态特征、多细胞性、生命周期阶段的数量以及适应不同环境的能力。Euglena gracilis符合其中几项标准,它的基因组庞大,有38000个蛋白质编码基因,在许多不同的条件下都有相当强的生存能力,其中一些条件可以说是具有挑战性的或严酷的。将这些方面联系在一起的潜在复杂性分子典范是信号通路,包括 GTP 酶、激酶和泛素化,它们将基因编码蛋白质组的功能提高了许多倍。其中每一个例子都能调节蛋白质活性和基因表达。为了探讨基因组大小与复杂性之间的联系,我对蟛蜞菊的小ras样 GTPase 超家族进行了简单的定性调查。出乎意料的是,除了控制细胞内转运和细胞器识别的Rab-GTP酶外,GTP酶超家族的规模并不大,例如,与近亲锥虫相比,GTP酶超家族并没有随着基因数量的增加而增加。我认为,了解这一蛋白家族的功能对于揭示蟛蜞菊生物学的复杂性至关重要。
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Ras superfamily GTPases and signal transduction in Euglena gracilis

Biological complexity is challenging to define, but can be considered through one or more features, including overall genome size, number of genes, morphological features, multicellularity, number of life cycle stages and the ability to adapt to different environments. Euglena gracilis meets several of these criteria, with a large genome of ∼38,000 protein coding genes and a considerable ability to survive under many different conditions, some of which can be described as challenging or harsh. Potential molecular exemplars of complexity tying these aspects together are signalling pathways, including GTPases, kinases and ubiquitylation, which increase the functionality of the gene-encoded proteome manyfold. Each of these examples can modulate both protein activity and gene expression. To address the connection between genome size and complexity I have undertaken a brief, and somewhat qualitative, survey of the small ras-like GTPase superfamily of E. gracilis. Unexpectedly, apart from Rab-GTPases which control intracellular transport and organelle identify, the size of the GTPase cohort is modest, and, for example, has not scaled with gene number when compared to the close relatives, trypanosomatids. I suggest that understanding the functions of this protein family will be vital to uncovering the complexity of E. gracilis biology.

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来源期刊
Protist
Protist 生物-微生物学
CiteScore
3.60
自引率
4.00%
发文量
43
审稿时长
18.7 weeks
期刊介绍: Protist is the international forum for reporting substantial and novel findings in any area of research on protists. The criteria for acceptance of manuscripts are scientific excellence, significance, and interest for a broad readership. Suitable subject areas include: molecular, cell and developmental biology, biochemistry, systematics and phylogeny, and ecology of protists. Both autotrophic and heterotrophic protists as well as parasites are covered. The journal publishes original papers, short historical perspectives and includes a news and views section.
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