前肠发酵啮齿动物、反刍动物和灵长类动物胃溶菌酶的功能趋同并不归因于分子进化的趋同。

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY Accounts of Chemical Research Pub Date : 2024-02-10 DOI:10.1016/j.cbpb.2024.110949
Nick Barts , Roshni H. Bhatt , Chelsea Toner , Wynn K. Meyer , Jacob D. Durrant , Kevin D. Kohl
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引用次数: 0

摘要

趋同进化是一种普遍现象。虽然在表型尺度上有许多趋同进化的例子,但分子水平上的趋同进化却较难识别。跨尺度趋同进化的一个典型例子是反刍动物和疣猴体内的消化溶菌酶。这些草食性物种依赖前肠发酵,而前肠发酵在酸性条件下进化得更为理想。在这里,我们探讨了具有相似饮食策略和消化系统形态的啮齿动物是否进化出了具有消化功能的溶菌酶。在表型水平上,我们发现具有双胃形态的啮齿类动物表现出一种溶菌酶,在低pH值条件下保持较高的相对活性,这与反刍动物和疣猴的溶菌酶相似。此外,白猴的溶菌酶与以前发现的消化溶菌酶的质子化状态相似。然而,我们在前肠发酵物种的溶菌酶基因上发现的正选择证据有限,而且没有发现该基因的趋同分子进化模式。这项研究强调,表型趋同不一定是基因修饰趋同的结果,我们鼓励进一步探索跨生物尺度的趋同调控机制。
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Functional convergence in gastric lysozymes of foregut-fermenting rodents, ruminants, and primates is not attributed to convergent molecular evolution

Convergent evolution is a widespread phenomenon. While there are many examples of convergent evolution at the phenotypic scale, convergence at the molecular level has been more difficult to identify. A classic example of convergent evolution across scales is that of the digestive lysozyme found in ruminants and Colobine monkeys. These herbivorous species rely on foregut fermentation, which has evolved to function more optimally under acidic conditions. Here, we explored if rodents with similar dietary strategies and digestive morphologies have convergently evolved a lysozyme with digestive functions. At the phenotypic level, we find that rodents with bilocular stomach morphologies exhibited a lysozyme that maintained higher relative activities at low pH values, similar to the lysozymes of ruminants and Colobine monkeys. Additionally, the lysozyme of Peromyscus leucopus shared a similar predicted protonation state as that observed in previously identified digestive lysozymes. However, we found limited evidence of positive selection acting on the lysozyme gene in foregut-fermenting species and did not identify patterns of convergent molecular evolution in this gene. This study emphasizes that phenotypic convergence need not be the result of convergent genetic modifications, and we encourage further exploration into the mechanisms regulating convergence across biological scales.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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