秋水仙碱对急性肺损伤治疗潜力的网络药理学分析

IF 2.2 4区 医学 Q2 MEDICINE, GENERAL & INTERNAL International Journal of Clinical Practice Pub Date : 2024-02-06 DOI:10.1155/2024/9940182
Fei Sun, Lijuan Zhang, Lulu Shen, Chunman Wang
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引用次数: 0

摘要

背景:本研究采用整合网络药理学方法探讨秋水仙碱对急性肺损伤(ALI)的保护作用机制:本研究采用整合网络药理学方法探讨秋水仙碱对急性肺损伤(ALI)的保护作用机制:我们分析了13例脓毒症相关ALI患者和21例对照组的表达谱,以确定差异表达基因和关键模块。我们利用 DisGeNET、Therapeutic Target 和比较毒物基因组学数据库等数据库对 ALI 相关基因进行了整理。使用 DrugBank、BATMAN-TCM、STITCH 和 SwissTargetPrediction 对秋水仙碱进行药物靶点筛选。通过将 ALI 相关基因与秋水仙碱靶基因交叉,确定了潜在的药物-疾病相互作用。我们对这些基因进行了全面的通路和过程富集分析。我们构建了蛋白质-蛋白质相互作用网络,并进行了拓扑分析。此外,我们还建立了 ALI 小鼠模型,通过 Western 印迹分析评估秋水仙碱对 CXCL12 和 CXCR4 水平的影响:结果:从253个ALI相关基因和389个秋水仙碱靶点的交叉点中,分析发现了23个潜在的秋水仙碱-ALI相互作用基因。功能富集分析强调了几个炎症相关通路,如细胞因子介导的信号通路、CXCR趋化因子受体结合、NF-kappa B 信号通路、TNF 信号通路和 IL-17 信号通路。蛋白-蛋白相互作用网络显示,CXCL12和CXCR4与其他候选基因之间存在复杂的相互作用,并具有显著的拓扑相互作用度。体内研究表明,秋水仙碱能显著降低 ALI 小鼠体内升高的 CXCL12 和 CXCR4 水平:我们的研究结果表明,秋水仙碱对 ALI 的治疗作用可能来自于其抗炎特性。我们需要进一步研究秋水仙碱与脓毒症诱导的 ALI 相互作用的具体机制。
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Network Pharmacology Analysis of the Therapeutic Potential of Colchicine in Acute Lung Injury

Background. This study employed integrated network pharmacology approach to explore the mechanisms underlying the protective effect of colchicine against acute lung injury (ALI). Methods. We analyzed the expression profiles from 13 patients with sepsis-related ALI and 21 controls to identify differentially expressed genes and key modules. ALI-related genes were curated using databases such as DisGeNET, Therapeutic Target, and Comparative Toxicogenomics Database to curate ALI-related genes. Drug target fishing for colchicine was conducted using the DrugBank, BATMAN-TCM, STITCH, and SwissTargetPrediction. Potential drug-disease interactions were determined by intersecting ALI-associated genes with colchicine target genes. We performed comprehensive pathway and process enrichment analyses on these genes. A protein-protein interaction network was constructed, and topological analysis was executed. Additionally, an ALI mouse model was established to evaluate the effect of colchicine on CXCL12 and CXCR4 levels through western blot analysis. Results. Analysis revealed 23 potential colchicine-ALI interaction genes from the intersection of 253 ALI-associated genes and 389 colchicine targets. Functional enrichment analysis highlighted several inflammation-related pathways, such as cytokine-mediated signaling pathway, CXCR chemokine receptor binding, NF-kappa B signaling pathway, TNF signaling pathway, and IL-17 signaling pathway. The protein-protein interaction network demonstrated complex interactions for CXCL12 and CXCR4 among other candidate genes, with significant topological interaction degrees. In vivo studies showed that colchicine significantly reduced elevated CXCL12 and CXCR4 levels in ALI mice. Conclusion. Our findings suggest that colchicine’s therapeutic effect on ALI might derive from its anti-inflammatory properties. Further research is needed to explore the specific mechanisms of colchicine’s interaction with sepsis-induced ALI.

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来源期刊
CiteScore
5.30
自引率
0.00%
发文量
274
审稿时长
3-8 weeks
期刊介绍: IJCP is a general medical journal. IJCP gives special priority to work that has international appeal. IJCP publishes: Editorials. IJCP Editorials are commissioned. [Peer reviewed at the editor''s discretion] Perspectives. Most IJCP Perspectives are commissioned. Example. [Peer reviewed at the editor''s discretion] Study design and interpretation. Example. [Always peer reviewed] Original data from clinical investigations. In particular: Primary research papers from RCTs, observational studies, epidemiological studies; pre-specified sub-analyses; pooled analyses. [Always peer reviewed] Meta-analyses. [Always peer reviewed] Systematic reviews. From October 2009, special priority will be given to systematic reviews. [Always peer reviewed] Non-systematic/narrative reviews. From October 2009, reviews that are not systematic will be considered only if they include a discrete Methods section that must explicitly describe the authors'' approach. Special priority will, however, be given to systematic reviews. [Always peer reviewed] ''How to…'' papers. Example. [Always peer reviewed] Consensus statements. [Always peer reviewed] Short reports. [Always peer reviewed] Letters. [Peer reviewed at the editor''s discretion] International scope IJCP publishes work from investigators globally. Around 30% of IJCP articles list an author from the UK. Around 30% of IJCP articles list an author from the USA or Canada. Around 45% of IJCP articles list an author from a European country that is not the UK. Around 15% of articles published in IJCP list an author from a country in the Asia-Pacific region.
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