生物打印迎接人工智能时代:为药物发现平台 SAFIRE 开发基于人工智能的 ADMET 模型。

IF 3.2 4区 医学 Q3 CHEMISTRY, MEDICINAL Future medicinal chemistry Pub Date : 2024-04-01 Epub Date: 2024-02-19 DOI:10.4155/fmc-2024-0007
Sarah E Biehn, Luis Miguel Goncalves, Juerg Lehmann, Jessica D Marty, Christoph Mueller, Samuel A Ramirez, Fabien Tillier, Carleton R Sage
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引用次数: 0

摘要

背景:为了优先选择更有可能成功的化合物,人工智能模型可用于快速高效地预测分子的吸收、分布、代谢、排泄和毒性(ADMET)特性。方法:使用 BioPrint 数据库专有数据和公共数据集训练模型,以预测 SAFIRE 平台的各种 ADMET 终点。结果SAFIRE 模型的准确率达到或超过 75%,与验证集的马修相关系数为 0.4。使用专有数据和公共数据进行训练提高了模型性能,扩大了模型训练的化学空间。该平台具有评分功能,可为用户决策提供指导。结论高质量的数据集加上化学空间的考虑,使 ADMET 模型在药物发现过程中表现出良好的实用性。
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BioPrint meets the AI age: development of artificial intelligence-based ADMET models for the drug-discovery platform SAFIRE.

Background: To prioritize compounds with a higher likelihood of success, artificial intelligence models can be used to predict absorption, distribution, metabolism, excretion and toxicity (ADMET) properties of molecules quickly and efficiently. Methods: Models were trained with BioPrint database proprietary data along with public datasets to predict various ADMET end points for the SAFIRE platform. Results: SAFIRE models performed at or above 75% accuracy and 0.4 Matthew's correlation coefficient with validation sets. Training with both proprietary and public data improved model performance and expanded the chemical space on which the models were trained. The platform features scoring functionality to guide user decision-making. Conclusion: High-quality datasets along with chemical space considerations yielded ADMET models performing favorably with utility in the drug discovery process.

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来源期刊
Future medicinal chemistry
Future medicinal chemistry CHEMISTRY, MEDICINAL-
CiteScore
5.80
自引率
2.40%
发文量
118
审稿时长
4-8 weeks
期刊介绍: Future Medicinal Chemistry offers a forum for the rapid publication of original research and critical reviews of the latest milestones in the field. Strong emphasis is placed on ensuring that the journal stimulates awareness of issues that are anticipated to play an increasingly central role in influencing the future direction of pharmaceutical chemistry. Where relevant, contributions are also actively encouraged on areas as diverse as biotechnology, enzymology, green chemistry, genomics, immunology, materials science, neglected diseases and orphan drugs, pharmacogenomics, proteomics and toxicology.
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