腹泻丹顶鹤(G. japonensis)的病毒组特征。

IF 4.9 Q1 MICROBIOLOGY Animal microbiome Pub Date : 2024-02-28 DOI:10.1186/s42523-024-00299-3
Ning Cui, Xiao Yang, Hong Sui, Liugang Tan, Weihua Wang, Shuai Su, Lihong Qi, Qinghua Huang, Nataliia Hrabchenko, Chuantian Xu
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引用次数: 0

摘要

背景介绍丹顶鹤是易危鸟类之一。虽然在过去十年中,人工饲养的丹顶鹤数量显著增加,但传染病可能导致幼年丹顶鹤死亡,而病毒学研究却很少:方法:我们采用病毒元基因组学方法,分析了中国山东省东营生物圈保护区出现腹泻症状的死亡人工饲养丹顶鹤的组织病毒组,以及在相应人工饲养繁殖中心繁殖的丹顶鹤个体的粪便病毒组:结果:粪便中的DNA和RNA病毒含量远高于组织中的含量。组织和粪便中均检测到与肠道疾病相关的皮卡病毒科 RNA 病毒和副粘病毒科 DNA 病毒。研究中发现的皮卡病毒、基因组病毒和副粘病毒的基因组特征完整,这进一步表明这些科的传染性病毒可能存在于患病的丹顶鹤体内:结论:Ricornaviridae科的RNA病毒、Genomoviridae科和Parvoviridae科的DNA病毒可能是导致丹顶鹤腹泻的病原体。这项研究扩大了我们对丹顶鹤病毒组的了解,为阐明丹顶鹤腹泻的病因提供了基础。
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Virome characterization of diarrheic red-crowned crane (G. japonensis).

Background: The red-crowned crane is one of the vulnerable bird species. Although the captive population has markedly increased over the last decade, infectious diseases can lead to the death of young red-crowned cranes while few virological studies have been conducted.

Methods: Using a viral metagenomics approach, we analyzed the virome of tissues of the dead captive red-crowned crane with diarrhea symptoms in Dongying Biosphere Reserve, Shandong Province, China and feces of individual birds breeding at the corresponding captive breeding center, which were pooled separately.

Results: There is much more DNA and RNA viruses in the feces than that of the tissues. RNA virus belonging to the families Picornaviridae, and DNA viruses belonging to the families Parvoviridae, associated with enteric diseases were detected in the tissues and feces. Genomes of the picornavirus, genomovirus, and parvovirus identified in the study were fully characterized, which further suggested that infectious viruses of these families were possibly presented in the diseased red-crowned crane.

Conclusion: RNA virus belonging to the families Picornaviridae, and DNA viruses belonging to the families Genomoviridae and Parvoviridae were possibly the causative agent for diarrhea of red-crowned crane. This study has expanded our understanding of the virome of red-crowned crane and provides a baseline for elucidating the etiology for diarrhea of the birds.

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