探索基因调控相互作用网络并预测下咽癌和表皮生长因子受体突变肺腺癌的治疗分子

Abanti Bhattacharjya, Md Manowarul Islam, Md Ashraf Uddin, Md. Alamin Talukder, AKM Azad, Sunil Aryal, Bikash Kumar Paul, Wahia Tasnim, Muhammad Ali Abdulllah Almoyad, Mohammad Ali Moni
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引用次数: 0

摘要

随着信息技术的发展,生物信息学研究领域对研究人员和学者的吸引力与日俱增。近年来,各种生物信息学工具包的发展促进了对人类感知的大量生物数据的快速处理和分析。大多数研究的重点是找出两种相互关联的疾病,并通过观察构建多样化的基因调控相互作用网络,进而设计出治疗疾病的通用药物。例如,下咽癌是一种与表皮生长因子受体突变的肺腺癌相关的疾病。为了开展这项研究,我们从 NCBI 控制的在线数据库 GEO(GeneExpression Omnibus)中收集了 Mircorarray 数据集。我们从 NCBI 控制的在线数据库 GEO(GeneExpression Omnibus)中收集了 Mircorarray 数据集,并检测了所选两种疾病之间的差异表达基因、常见基因和枢纽基因,以便进行后续研究。我们的研究结果根据度拓扑法和最大克立中心性(MCC),以相互作用最高的 10 个枢纽基因为基础,提出了所选疾病的共用治疗分子。我们建议的治疗分子将同时对这两种疾病的患者产生疗效。
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Exploring Gene Regulatory Interaction Networks and predicting therapeutic molecules for Hypopharyngeal Cancer and EGFR-mutated lung adenocarcinoma
With the advent of Information technology, the Bioinformatics research field is becoming increasingly attractive to researchers and academicians. The recent development of various Bioinformatics toolkits has facilitated the rapid processing and analysis of vast quantities of biological data for human perception. Most studies focus on locating two connected diseases and making some observations to construct diverse gene regulatory interaction networks, a forerunner to general drug design for curing illness. For instance, Hypopharyngeal cancer is a disease that is associated with EGFR-mutated lung adenocarcinoma. In this study, we select EGFR-mutated lung adenocarcinoma and Hypopharyngeal cancer by finding the Lung metastases in hypopharyngeal cancer. To conduct this study, we collect Mircorarray datasets from GEO (Gene Expression Omnibus), an online database controlled by NCBI. Differentially expressed genes, common genes, and hub genes between the selected two diseases are detected for the succeeding move. Our research findings have suggested common therapeutic molecules for the selected diseases based on 10 hub genes with the highest interactions according to the degree topology method and the maximum clique centrality (MCC). Our suggested therapeutic molecules will be fruitful for patients with those two diseases simultaneously.
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