通过多空间-表面参数和机器学习,利用光学相干断层扫描技术进行多细胞肿瘤球体类别识别和药物筛选分类

IF 2.9 2区 医学 Q2 BIOCHEMICAL RESEARCH METHODS Biomedical optics express Pub Date : 2024-03-04 DOI:10.1364/boe.514079
Feng Yan, Bornface Mutembei, Trisha Valerio, Gokhan Gunay, Ji-Hee Ha, Qinghao Zhang, Chen Wang, Ebenezer Raj Selvaraj Mercyshalinie, Zaid A. Alhajeri, Fan Zhang, Lauren E. Dockery, Xinwei Li, Ronghao Liu, Danny N. Dhanasekaran, Handan Acar, Wei R. Chen, and Qinggong Tang
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引用次数: 0

摘要

光学相干断层扫描(OCT)是对多细胞肿瘤球(MCTS)进行无创和纵向监测的理想成像技术。然而,从 OCT 图像中获得的多细胞肿瘤球内部结构特征仍未得到充分利用。在本研究中,我们开发了交叉统计、交叉筛选和复合超参数特征处理方法,并结合 12 个机器学习模型来评估多细胞肿瘤球内部结构的变化。结果表明,有效特征与监督学习模型相结合,成功地对培养细胞数为 5,000 和 50,000 的 OVCAR-8 MCTS、培养成纤维细胞比例为 0%、33%、50% 和 67% 的胰腺肿瘤细胞(Panc02-H7)MCTS 以及经 2-甲氧基雌二醇、AZD1208 和 R-Ketorolac 处理(浓度为 1、10 和 25 µM)的 OVCAR-4 MCTS 进行了分类。这种方法有望在抗癌研究中利用 OCT 和 MCTS 获得多维生理和功能评估。
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Optical coherence tomography for multicellular tumor spheroid category recognition and drug screening classification via multi-spatial-superficial-parameter and machine learning
Optical coherence tomography (OCT) is an ideal imaging technique for noninvasive and longitudinal monitoring of multicellular tumor spheroids (MCTS). However, the internal structure features within MCTS from OCT images are still not fully utilized. In this study, we developed cross-statistical, cross-screening, and composite-hyperparameter feature processing methods in conjunction with 12 machine learning models to assess changes within the MCTS internal structure. Our results indicated that the effective features combined with supervised learning models successfully classify OVCAR-8 MCTS culturing with 5,000 and 50,000 cell numbers, MCTS with pancreatic tumor cells (Panc02-H7) culturing with the ratio of 0%, 33%, 50%, and 67% of fibroblasts, and OVCAR-4 MCTS treated by 2-methoxyestradiol, AZD1208, and R-ketorolac with concentrations of 1, 10, and 25 µM. This approach holds promise for obtaining multi-dimensional physiological and functional evaluations for using OCT and MCTS in anticancer studies.
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来源期刊
Biomedical optics express
Biomedical optics express BIOCHEMICAL RESEARCH METHODS-OPTICS
CiteScore
6.80
自引率
11.80%
发文量
633
审稿时长
1 months
期刊介绍: The journal''s scope encompasses fundamental research, technology development, biomedical studies and clinical applications. BOEx focuses on the leading edge topics in the field, including: Tissue optics and spectroscopy Novel microscopies Optical coherence tomography Diffuse and fluorescence tomography Photoacoustic and multimodal imaging Molecular imaging and therapies Nanophotonic biosensing Optical biophysics/photobiology Microfluidic optical devices Vision research.
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