Pocillopora damicornis 珊瑚幼虫对酸化和海洋变暖的基因表达。

IF 1.9 Q3 GENETICS & HEREDITY BMC genomic data Pub Date : 2024-03-08 DOI:10.1186/s12863-024-01211-3
Youfang Sun, Yi Lan, Nils Rädecker, Huaxia Sheng, Guillermo Diaz-Pulido, Pei-Yuan Qian, Hui Huang
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引用次数: 0

摘要

目的:与共生藻科植物的内共生关系是造礁珊瑚生态成功的关键。然而,气候变化有可能在全球范围内破坏这种共生关系。大多数关于珊瑚对热应力和海洋酸化反应的研究都集中在珊瑚群上。因此,我们对珊瑚生命周期其他阶段的共生相互作用和应激反应的了解仍然有限。因此,建立压力下珊瑚幼虫的转录组资源可以为了解共生的基因组基础及其对气候变化的易感性奠定基础。在这里,我们展示了一个基因表达数据集,该数据集是从大角荚膜珊瑚(Pocillopora damicornis)幼虫暴露于酸化和温度升高(低于共生关系的漂白阈值)条件下产生的反应:该数据集由四个处理(对照组、高pCO2处理组、高温处理组以及pCO2和温度组合处理组)收集的16个样本(每个样本30只幼虫)组成。新鲜采集的幼虫在处理条件下暴露了五天,为了解生命周期中这一脆弱阶段的基因表达提供了宝贵的信息。结合以前发表的数据集,该转录组资源将有助于深入研究海洋酸化和温度升高对珊瑚幼虫的影响及其对共生关系的影响。
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Gene expression of Pocillopora damicornis coral larvae in response to acidification and ocean warming.

Objectives: The endosymbiosis with Symbiodiniaceae is key to the ecological success of reef-building corals. However, climate change is threatening to destabilize this symbiosis on a global scale. Most studies looking into the response of corals to heat stress and ocean acidification focus on coral colonies. As such, our knowledge of symbiotic interactions and stress response in other stages of the coral lifecycle remains limited. Establishing transcriptomic resources for coral larvae under stress can thus provide a foundation for understanding the genomic basis of symbiosis, and its susceptibility to climate change. Here, we present a gene expression dataset generated from larvae of the coral Pocillopora damicornis in response to exposure to acidification and elevated temperature conditions below the bleaching threshold of the symbiosis.

Data description: This dataset is comprised of 16 samples (30 larvae per sample) collected from four treatments (Control, High pCO2, High Temperature, and Combined pCO2 and Temperature treatments). Freshly collected larvae were exposed to treatment conditions for five days, providing valuable insights into gene expression in this vulnerable stage of the lifecycle. In combination with previously published datasets, this transcriptomic resource will facilitate the in-depth investigation of the effects of ocean acidification and elevated temperature on coral larvae and its implication for symbiosis.

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