{"title":"ORTEGA v1.0:使用运动数据进行情境感知交互分析的开源 Python 软件包。","authors":"Rongxiang Su, Yifei Liu, Somayeh Dodge","doi":"10.1186/s40462-024-00460-2","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Interaction analysis via movement in space and time contributes to understanding social relationships among individuals and their dynamics in ecological systems. While there is an exciting growth in research in computational methods for interaction analysis using movement data, there remain challenges regarding reproducibility and replicability of the existing approaches. The current movement interaction analysis tools are often less accessible or tested for broader use in ecological research.</p><p><strong>Results: </strong>To address these challenges, this paper presents ORTEGA, an Object-oRiented TimE-Geographic Analytical tool, as an open-source Python package for analyzing potential interactions between pairs of moving entities based on the observation of their movement. ORTEGA is developed based on one of the newly emerged time-geographic approaches for quantifying space-time interaction patterns among animals. A case study is presented to demonstrate and evaluate the functionalities of ORTEGA in tracing dynamic interaction patterns in animal movement data. Besides making the analytical code and data freely available to the community, the developed package also offers an extension of the existing theoretical development of ORTEGA for incorporating a context-aware ability to inform interaction analysis.</p><p><strong>Conclusions: </strong>ORTEGA contributes two significant capabilities: (1) the functions to identify potential interactions (e.g., encounters, concurrent interactions, delayed interactions) from movement data of two or more entities using a time-geographic-based approach; and (2) the capacity to compute attributes of potential interaction events including start time, end time, interaction duration, and difference in movement parameters such as speed and moving direction, and also contextualize the identified potential interaction events.</p>","PeriodicalId":54288,"journal":{"name":"Movement Ecology","volume":"12 1","pages":"20"},"PeriodicalIF":3.4000,"publicationDate":"2024-03-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10925014/pdf/","citationCount":"0","resultStr":"{\"title\":\"ORTEGA v1.0: an open-source Python package for context-aware interaction analysis using movement data.\",\"authors\":\"Rongxiang Su, Yifei Liu, Somayeh Dodge\",\"doi\":\"10.1186/s40462-024-00460-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Interaction analysis via movement in space and time contributes to understanding social relationships among individuals and their dynamics in ecological systems. While there is an exciting growth in research in computational methods for interaction analysis using movement data, there remain challenges regarding reproducibility and replicability of the existing approaches. The current movement interaction analysis tools are often less accessible or tested for broader use in ecological research.</p><p><strong>Results: </strong>To address these challenges, this paper presents ORTEGA, an Object-oRiented TimE-Geographic Analytical tool, as an open-source Python package for analyzing potential interactions between pairs of moving entities based on the observation of their movement. ORTEGA is developed based on one of the newly emerged time-geographic approaches for quantifying space-time interaction patterns among animals. A case study is presented to demonstrate and evaluate the functionalities of ORTEGA in tracing dynamic interaction patterns in animal movement data. Besides making the analytical code and data freely available to the community, the developed package also offers an extension of the existing theoretical development of ORTEGA for incorporating a context-aware ability to inform interaction analysis.</p><p><strong>Conclusions: </strong>ORTEGA contributes two significant capabilities: (1) the functions to identify potential interactions (e.g., encounters, concurrent interactions, delayed interactions) from movement data of two or more entities using a time-geographic-based approach; and (2) the capacity to compute attributes of potential interaction events including start time, end time, interaction duration, and difference in movement parameters such as speed and moving direction, and also contextualize the identified potential interaction events.</p>\",\"PeriodicalId\":54288,\"journal\":{\"name\":\"Movement Ecology\",\"volume\":\"12 1\",\"pages\":\"20\"},\"PeriodicalIF\":3.4000,\"publicationDate\":\"2024-03-09\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10925014/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Movement Ecology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1186/s40462-024-00460-2\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ECOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Movement Ecology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s40462-024-00460-2","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ECOLOGY","Score":null,"Total":0}
ORTEGA v1.0: an open-source Python package for context-aware interaction analysis using movement data.
Background: Interaction analysis via movement in space and time contributes to understanding social relationships among individuals and their dynamics in ecological systems. While there is an exciting growth in research in computational methods for interaction analysis using movement data, there remain challenges regarding reproducibility and replicability of the existing approaches. The current movement interaction analysis tools are often less accessible or tested for broader use in ecological research.
Results: To address these challenges, this paper presents ORTEGA, an Object-oRiented TimE-Geographic Analytical tool, as an open-source Python package for analyzing potential interactions between pairs of moving entities based on the observation of their movement. ORTEGA is developed based on one of the newly emerged time-geographic approaches for quantifying space-time interaction patterns among animals. A case study is presented to demonstrate and evaluate the functionalities of ORTEGA in tracing dynamic interaction patterns in animal movement data. Besides making the analytical code and data freely available to the community, the developed package also offers an extension of the existing theoretical development of ORTEGA for incorporating a context-aware ability to inform interaction analysis.
Conclusions: ORTEGA contributes two significant capabilities: (1) the functions to identify potential interactions (e.g., encounters, concurrent interactions, delayed interactions) from movement data of two or more entities using a time-geographic-based approach; and (2) the capacity to compute attributes of potential interaction events including start time, end time, interaction duration, and difference in movement parameters such as speed and moving direction, and also contextualize the identified potential interaction events.
Movement EcologyAgricultural and Biological Sciences-Ecology, Evolution, Behavior and Systematics
CiteScore
6.60
自引率
4.90%
发文量
47
审稿时长
23 weeks
期刊介绍:
Movement Ecology is an open-access interdisciplinary journal publishing novel insights from empirical and theoretical approaches into the ecology of movement of the whole organism - either animals, plants or microorganisms - as the central theme. We welcome manuscripts on any taxa and any movement phenomena (e.g. foraging, dispersal and seasonal migration) addressing important research questions on the patterns, mechanisms, causes and consequences of organismal movement. Manuscripts will be rigorously peer-reviewed to ensure novelty and high quality.