{"title":"FASSt:通过对称自动编码器对球形表层白质分层图进行过滤。","authors":"Yuan Li, Xinyu Nie, Yao Fu, Yonggang Shi","doi":"10.1007/978-3-031-47292-3_12","DOIUrl":null,"url":null,"abstract":"<p><p>Superficial white matter (SWM) plays an important role in functioning of the human brain, and it contains a large amount of cortico-cortical connections. However, the difficulties of generating complete and reliable U-fibers make SWM-related analysis lag behind relatively matured Deep white matter (DWM) analysis. With the aid of some newly proposed surface-based SWM tractography algorithms, we have developed a specialized SWM filtering method based on a symmetric variational autoencoder (VAE). In this work, we first demonstrate the advantage of the spherical representation and generate these spherical tracts using the triangular mesh and the registered spherical surface. We then introduce the Filtering via symmetric Autoencoder for Spherical Superficial White Matter tractography (FASSt) framework with a novel symmetric weights module to perform the filtering task in a latent space. We evaluate and compare our method with the state-of-the-art clustering-based method on diffusion MRI data from Human Connectome Project (HCP). The results show that our proposed method outperform these clustering methods and achieves excellent performance in groupwise consistency and topographic regularity.</p>","PeriodicalId":72661,"journal":{"name":"Computational diffusion MRI : MICCAI Workshop","volume":"14328 ","pages":"129-139"},"PeriodicalIF":0.0000,"publicationDate":"2023-10-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10948089/pdf/","citationCount":"0","resultStr":"{\"title\":\"FASSt : Filtering via Symmetric Autoencoder for Spherical Superficial White Matter Tractography.\",\"authors\":\"Yuan Li, Xinyu Nie, Yao Fu, Yonggang Shi\",\"doi\":\"10.1007/978-3-031-47292-3_12\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Superficial white matter (SWM) plays an important role in functioning of the human brain, and it contains a large amount of cortico-cortical connections. However, the difficulties of generating complete and reliable U-fibers make SWM-related analysis lag behind relatively matured Deep white matter (DWM) analysis. With the aid of some newly proposed surface-based SWM tractography algorithms, we have developed a specialized SWM filtering method based on a symmetric variational autoencoder (VAE). In this work, we first demonstrate the advantage of the spherical representation and generate these spherical tracts using the triangular mesh and the registered spherical surface. We then introduce the Filtering via symmetric Autoencoder for Spherical Superficial White Matter tractography (FASSt) framework with a novel symmetric weights module to perform the filtering task in a latent space. We evaluate and compare our method with the state-of-the-art clustering-based method on diffusion MRI data from Human Connectome Project (HCP). The results show that our proposed method outperform these clustering methods and achieves excellent performance in groupwise consistency and topographic regularity.</p>\",\"PeriodicalId\":72661,\"journal\":{\"name\":\"Computational diffusion MRI : MICCAI Workshop\",\"volume\":\"14328 \",\"pages\":\"129-139\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-10-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10948089/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computational diffusion MRI : MICCAI Workshop\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/978-3-031-47292-3_12\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/2/7 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computational diffusion MRI : MICCAI Workshop","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/978-3-031-47292-3_12","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/2/7 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
表层白质(SWM)在人脑功能中发挥着重要作用,它包含大量皮质-皮质连接。然而,由于难以生成完整可靠的 U 纤维,表层白质相关分析落后于相对成熟的深层白质(DWM)分析。借助一些新提出的基于表面的 SWM 牵引成像算法,我们开发了一种基于对称变异自动编码器(VAE)的专门 SWM 滤波方法。在这项工作中,我们首先展示了球面表示法的优势,并使用三角形网格和注册的球面生成这些球面牵引。然后,我们介绍了通过对称自动编码器进行球形表层白质束成像过滤(FASSt)框架,该框架具有一个新颖的对称权重模块,可在潜空间中执行过滤任务。我们在人类连接组计划(HCP)的弥散核磁共振成像数据上评估并比较了我们的方法和最先进的基于聚类的方法。结果表明,我们提出的方法优于这些聚类方法,并在分组一致性和拓扑规则性方面取得了优异的表现。
FASSt : Filtering via Symmetric Autoencoder for Spherical Superficial White Matter Tractography.
Superficial white matter (SWM) plays an important role in functioning of the human brain, and it contains a large amount of cortico-cortical connections. However, the difficulties of generating complete and reliable U-fibers make SWM-related analysis lag behind relatively matured Deep white matter (DWM) analysis. With the aid of some newly proposed surface-based SWM tractography algorithms, we have developed a specialized SWM filtering method based on a symmetric variational autoencoder (VAE). In this work, we first demonstrate the advantage of the spherical representation and generate these spherical tracts using the triangular mesh and the registered spherical surface. We then introduce the Filtering via symmetric Autoencoder for Spherical Superficial White Matter tractography (FASSt) framework with a novel symmetric weights module to perform the filtering task in a latent space. We evaluate and compare our method with the state-of-the-art clustering-based method on diffusion MRI data from Human Connectome Project (HCP). The results show that our proposed method outperform these clustering methods and achieves excellent performance in groupwise consistency and topographic regularity.