三有机胺 N-氧化物衍生物 RR′R″N(+)O(-)晶体中涉及氧化物-O 原子的超分子关联研究

Edward R. T. Tiekink
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摘要

三甲胺 N-氧化物 Me3N(+)O(-) 是生物学和医学中的重要分子。本文对含有 Me3N(+)O(-) 衍生物(即 RR′R″N(+)O(-))的晶体中涉及氧化-O 原子的相互作用进行了研究;R,R′, R″ = 烷基和/或芳基。共分析了 119 个 RR′R″N(+)O(-)分子中涉及氧化物-O 原子的超分子相互作用。水合物是最大的一类晶体,在调查的 91 个晶体中占 40% 以上,这一数值略高于预期。超过 80% 的分子含有至少一个 O-H⋯O(-)(氧化物) 氢键:分别有 3%、45% 和 33% 的分子含有三个、两个或一个 O-H⋯O(-)(氧化物) 氢键。此外,近 15% 的分子至少形成了一个 N-H⋯O(-)(氧化物)氢键,有时与 O-H⋯O(-)(氧化物)氢键协同作用。绝大多数分子都具有分子间和/或分子内支持 C-H⋯O(-)(氧化物) 接触的特征,因此可以看到多种多样的超分子相互作用模式,而在晶体学不对称单元中有多个分子的晶体中,独立分子通常会出现不同的超分子关联模式,这使得情况变得更加复杂。在 6% 没有传统 A-H⋯O(-)(Oxide) 氢键的分子中,所有分子都形成了三个或四个分子间/分子内 C-H⋯O(-)(Oxide) 接触,通常至少有一个较短的 H⋯O(-)(Oxide) 间距。
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A survey of supramolecular association involving the oxide-O atom in the crystals of triorganoamine N-oxide derivatives, RR′R″N(+)O(−)
Trimethylamine N-oxide, Me3N(+)O(−), is an important molecule in biology and medicine. Herein, a survey of the interactions involving the oxide-O atom in crystals containing derivatives of Me3N(+)O(−), namely RR′R″N(+)O(−), is presented; R,R′, R″ = alkyl and/or aryl. A total of 119 RR′R″N(+)O(−) molecules were analysed for the supramolecular interactions involving the oxide-O atom. Hydrates form the largest class of crystals, comprising over 40 % of the 91 crystals investigated, a value slightly higher than expectation. Over 80 % of molecules had at least one O–H⋯O(−)(oxide) hydrogen bond: 3, 45 and 33 % of all molecules had three, two or one O–H⋯O(−)(oxide) hydrogen bonds, respectively. Further, nearly 15 % of molecules formed at least one N–H⋯O(−)(oxide) hydrogen bond, sometimes operating in concert with O–H⋯O(−)(oxide) hydrogen bonds. The overwhelming majority of molecules featured inter- and/or intra-molecular supporting C–H⋯O(−)(oxide) contacts so that a diverse range of supramolecular interaction patterns is apparent, a situation made more complicated by the appearance of different supramolecular association patterns often observed for independent molecules in crystals with more than one molecule in the crystallographic asymmetric-unit. Of the 6 % of molecules devoid of conventional A–H⋯O(−)(oxide) hydrogen bonds, all formed three or four inter-/intra-molecular C–H⋯O(−)(oxide) contacts usually characterised by at least one short H⋯O(−)(oxide) distance.
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