S. Khazaei, A. Dalimi, M. Pirestani, F. Ghafarifar
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引用次数: 0
摘要
背景:本研究旨在确定作为潜在候选疫苗的棘球蚴谷胱甘肽 S 转移酶蛋白的主要生化特征和免疫原表位。研究方法:采用了几种网络工具来预测理化性质、抗原性、过敏性、溶解度、翻译后修饰(PTM)位点、亚细胞定位、信号肽、跨膜域、二级和三级结构,然后进行细化和验证。此外,还利用各种网络服务器预测和筛选了 B 细胞表位,并分别利用 IEDB 和 NetCTL 服务器预测了 MHC 结合表位和 CTL 表位。研究结果该蛋白质有 219 个残基,分子量为 25.55 kDa,等电点 pH 值为 7.5。该蛋白质性质稳定,具有耐热性(脂肪指数:78.04)和亲水性(GRAVY:-0.440)。预测的抗原性得分较低,该蛋白质不具有致敏性。序列中没有跨膜结构域和信号肽。此外,在 EgGST 蛋白中还发现了多个 B 细胞、MHC 结合和 CTL 表位,可进一步用于多表位疫苗。结论今后还需要进一步研究如何单独使用 EgGST 或将其与其他抗原结合使用来开发体内疫苗。
Biochemical Properties and Immunogenic Epitopes of Echinococcus granulosus Glutathione S-Transferase as a Vaccine Target: In-Silico Study
Background: The current in silico study was done to determine the primary biochemical features and immunogenic epitopes of Echinococcus granulosus glutathione S-transferase protein as a potential vaccine candidate.
Methods: Several web tools were employed to predict physico-chemical properties, antigenicity, allergenicity, solubility, post-translational modification (PTM) sites, subcellular localization, signal peptide, transmembrane domain, secondary and tertiary structure followed by refinement and validations. In addition, B-cell epitopes were predicted and were screened using various web servers, while MHC-binding and CTL epitopes were predicted using IEDB and NetCTL servers, respectively.
Results: The protein had 219 residues with a molecular weight of 25.55 kDa and alkaline isoelectric pH (7.5). This protein was stable, thermotolerant (aliphatic index: 78.04) and hydrophilic (GRAVY: -0.440). The predicted antigenicity scores were low and the protein was non-allergenic in nature. There were no transmembrane domain and signal peptide in the sequence. Moreover, several B-cell, MHC-binding and CTL epitopes were found in the EgGST protein, which could be further used in multi-epitope vaccines.
Conclusion: Further studies are needed on the development of vaccines in vivo using EgGST alone or in combination with other antigens in the future.
期刊介绍:
Iranian Journal of Parasitology (IJP) is the official publication of Iranian Society of Parasitology (ISP) launched in 2006. The society was inaugurated in 1994 and pursues the improvement of the knowledge on the parasites and parasitic diseases, exchange of scientific knowledge with foreign societies, publicity activities, and consultation on the parasitic diseases, and intimate relationship among society members.
The main aims of the Journal are: contribution to the field of Parasitology, including all aspects of parasites and parasitic diseases (medical and veterinary) and related fields such as Entomology which may be submitted by scientists from Iran and all over the world.