混合蝙蝠算法-集合在候选药物人体口服生物利用度预测中的应用

Muhamad Farhan Wirasantoso, Hasmawati, I. Kurniawan
{"title":"混合蝙蝠算法-集合在候选药物人体口服生物利用度预测中的应用","authors":"Muhamad Farhan Wirasantoso, Hasmawati, I. Kurniawan","doi":"10.1109/ICETSIS61505.2024.10459424","DOIUrl":null,"url":null,"abstract":"One of significant parameters of Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) is Human Oral Bioavailability (HOB) which is crucial for determining the total of consumed drugs inside humans body circulation. Poor HOB results in undeterminable drug effects in the human body, with approximately 50% of drug candidates failing due to low oral availability. As many as 80% of drugs in the world use the oral route of entry into the body, so HOB prediction is very important to reduce side effects and the risk of toxicity brought by drugs. Unfortunately, oral bioavailability is currently predominantly measured in vivo consequently, developing in-silico methods is considered crucial. To reckon the human oral bioavailability of medication candidates, we used the Hybrid Bat Algorithm method for feature selection and the Ensemble method, i.e. Random Forest, AdaBoost, and XGBoost for the prediction model. The result showed that XGBoost as the best model in which the value of accuracy and Fl-score were 0.776, and 0.802, respectively.","PeriodicalId":518932,"journal":{"name":"2024 ASU International Conference in Emerging Technologies for Sustainability and Intelligent Systems (ICETSIS)","volume":"3 1","pages":"1663-1667"},"PeriodicalIF":0.0000,"publicationDate":"2024-01-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Implementation of Hybrid Bat Algorithm-Ensemble on Human Oral Bioavailability Prediction of Drug Candidate\",\"authors\":\"Muhamad Farhan Wirasantoso, Hasmawati, I. Kurniawan\",\"doi\":\"10.1109/ICETSIS61505.2024.10459424\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"One of significant parameters of Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) is Human Oral Bioavailability (HOB) which is crucial for determining the total of consumed drugs inside humans body circulation. Poor HOB results in undeterminable drug effects in the human body, with approximately 50% of drug candidates failing due to low oral availability. As many as 80% of drugs in the world use the oral route of entry into the body, so HOB prediction is very important to reduce side effects and the risk of toxicity brought by drugs. Unfortunately, oral bioavailability is currently predominantly measured in vivo consequently, developing in-silico methods is considered crucial. To reckon the human oral bioavailability of medication candidates, we used the Hybrid Bat Algorithm method for feature selection and the Ensemble method, i.e. Random Forest, AdaBoost, and XGBoost for the prediction model. The result showed that XGBoost as the best model in which the value of accuracy and Fl-score were 0.776, and 0.802, respectively.\",\"PeriodicalId\":518932,\"journal\":{\"name\":\"2024 ASU International Conference in Emerging Technologies for Sustainability and Intelligent Systems (ICETSIS)\",\"volume\":\"3 1\",\"pages\":\"1663-1667\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-01-28\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"2024 ASU International Conference in Emerging Technologies for Sustainability and Intelligent Systems (ICETSIS)\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1109/ICETSIS61505.2024.10459424\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"2024 ASU International Conference in Emerging Technologies for Sustainability and Intelligent Systems (ICETSIS)","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1109/ICETSIS61505.2024.10459424","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

吸收、分布、代谢、排泄和毒性(ADMET)的重要参数之一是人体口服生物利用度(HOB),它对于确定药物在人体循环中的总消耗量至关重要。人体口服生物利用度低会导致药物在人体内的作用无法确定,约有 50% 的候选药物因口服生物利用度低而失败。全球有多达 80% 的药物通过口服途径进入人体,因此预测口服生物利用度对于减少药物副作用和毒性风险非常重要。遗憾的是,目前口服生物利用度的测量主要是在体内进行的,因此开发体内方法至关重要。为了计算候选药物的人体口服生物利用度,我们使用混合蝙蝠算法(Hybrid Bat Algorithm)方法进行特征选择,并使用随机森林(Random Forest)、AdaBoost 和 XGBoost 等集合方法建立预测模型。结果表明,XGBoost 是最佳模型,其准确率和 Fl-score 值分别为 0.776 和 0.802。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Implementation of Hybrid Bat Algorithm-Ensemble on Human Oral Bioavailability Prediction of Drug Candidate
One of significant parameters of Absorption, Distribution, Metabolism, Excretion, and Toxicity (ADMET) is Human Oral Bioavailability (HOB) which is crucial for determining the total of consumed drugs inside humans body circulation. Poor HOB results in undeterminable drug effects in the human body, with approximately 50% of drug candidates failing due to low oral availability. As many as 80% of drugs in the world use the oral route of entry into the body, so HOB prediction is very important to reduce side effects and the risk of toxicity brought by drugs. Unfortunately, oral bioavailability is currently predominantly measured in vivo consequently, developing in-silico methods is considered crucial. To reckon the human oral bioavailability of medication candidates, we used the Hybrid Bat Algorithm method for feature selection and the Ensemble method, i.e. Random Forest, AdaBoost, and XGBoost for the prediction model. The result showed that XGBoost as the best model in which the value of accuracy and Fl-score were 0.776, and 0.802, respectively.
求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
期刊最新文献
Other reviewers Bean Leaf Lesions Image Classification: A Robust Ensemble Deep Learning Approach MTU Analyzing for Data Centers Interconnected Using VxLAN AFAR-YOLO: An Adaptive YOLO Object Detection Framework A Decision Support Framework for Sustainable Waste Disposal Technology Selection
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1