在人类细胞色素 c 中设计和制造人工二硫键,以调节蛋白质的结构和功能

IF 3.2 3区 工程技术 Q2 CHEMISTRY, PHYSICAL Molecular Systems Design & Engineering Pub Date : 2024-04-08 DOI:10.1039/D3ME00196B
Yan-Yan Li, Yu Feng, Lu Yu, Shuang-Shuang Long, Shu-Qin Gao and Ying-Wu Lin
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引用次数: 0

摘要

人类细胞色素 c(hCyt c)含有一个共价连接的六配位血红素基团(Met/His),具有重要的生物学功能,包括通过结构改变实现电子传递和过氧化物酶活性,以及通过与神经球蛋白(Ngb)等伙伴的相互作用实现其他功能。在这项研究中,我们通过双突变(A51C/G77C)在 hCyt c 中设计并构建了一个人工二硫键,该二硫键桥接 -loops C 和 D。质谱证实了分子内二硫键(Cys51-Cys77)的形成。分子建模研究表明,二硫键并没有改变整体结构,Cys51所在的局部结构很好地折叠成了一个-螺旋。为了探究二硫键对蛋白质结构的影响,还进行了光谱研究,结果表明 Met80 的血红素配位可能被削弱。因此,配体结合率和过氧化物酶活性都得到了提高。同时,滴定研究表明,hCyt c 与 Ngb 之间的相互作用减弱了。这些观察结果表明,-loops C 和 D 的动态特性可能有利于通过构象变化实现血红素配位和蛋白质之间的相互作用,从而支持 hCyt c 的原生功能。
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Design and engineering of an artificial disulfide bond in human cytochrome c to regulate the protein structure and function†

Human cytochrome c (hCyt c) contains a covalently attached heme group with six-coordination (Met/His) and plays vital biological functions, including electron transfer and peroxidase activity by structural alterations, as well as other functions by interactions with partners such as neuroglobin (Ngb). In this study, we designed and engineered an artificial disulfide bond in hCyt c via double mutations (A51C/G77C) which bridges the Ω-loops C and D. The formation of the intramolecular disulfide bond (Cys51–Cys77) was confirmed by mass spectrometry. The molecular modeling study showed that the disulfide bond did not alter the overall structure, and the local structure where Cys51 was located was well folded into an α-helix. Spectroscopic studies were also performed to probe the effects of the disulfide bond on the protein structure, which revealed that the heme coordination of Met80 was likely weakened. Consequently, the rate of ligand binding and the peroxidase activity were enhanced. Meanwhile, the interaction between hCyt c and Ngb was weakened, as suggested by titration studies. These observations indicate that the dynamic properties of Ω-loops C and D may favor the heme coordination and protein–protein interactions by conformational change, which supports the native functions of hCyt c.

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来源期刊
Molecular Systems Design & Engineering
Molecular Systems Design & Engineering Engineering-Biomedical Engineering
CiteScore
6.40
自引率
2.80%
发文量
144
期刊介绍: Molecular Systems Design & Engineering provides a hub for cutting-edge research into how understanding of molecular properties, behaviour and interactions can be used to design and assemble better materials, systems, and processes to achieve specific functions. These may have applications of technological significance and help address global challenges.
期刊最新文献
Back cover Back cover Dual responsive fluorescence switching of organohydrogel towards base/acid† Back cover Graph-based networks for accurate prediction of ground and excited state molecular properties from minimal features†
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