活细胞中微管长度调节的最基本机制

IF 2.2 4区 数学 Q2 BIOLOGY Bulletin of Mathematical Biology Pub Date : 2024-04-16 DOI:10.1007/s11538-024-01279-z
Anna C. Nelson, Melissa M. Rolls, Maria-Veronica Ciocanel, Scott A. McKinley
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引用次数: 0

摘要

微管细胞骨架负责神经元中 mRNA、蛋白质和细胞器的持续、长距离胞内运输。神经元微管必须足够稳定,以确保可靠的运输,但它们也有动态的不稳定性,因为它们的正负端会在生长和收缩之间不断切换。这一过程可使细胞骨架不断重建,并在受伤情况下保持灵活性。受果蝇神经元微管行为体内实验数据的启发,我们提出了树突微管动力学数学模型,重点是理解微管的长度、速度和状态-持续时间分布。我们发现,要实现逼真的动力学,需要对微管的生长阶段进行限制,但限制机制的类型会导致对合理的实验扰动做出质的不同反应。因此,我们提出并研究了两个最小复杂长度限制因素:资源(微管蛋白)限制和大长度微管灾难限制。我们将详细随机模型的模拟与均场常微分方程模型的稳态分析结合起来,绘制出定性的不同参数区。这为预测不同实验环境中微管动力学、微管蛋白分配和微管蛋白周转率的变化提供了基础。
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Minimal Mechanisms of Microtubule Length Regulation in Living Cells

The microtubule cytoskeleton is responsible for sustained, long-range intracellular transport of mRNAs, proteins, and organelles in neurons. Neuronal microtubules must be stable enough to ensure reliable transport, but they also undergo dynamic instability, as their plus and minus ends continuously switch between growth and shrinking. This process allows for continuous rebuilding of the cytoskeleton and for flexibility in injury settings. Motivated by in vivo experimental data on microtubule behavior in Drosophila neurons, we propose a mathematical model of dendritic microtubule dynamics, with a focus on understanding microtubule length, velocity, and state-duration distributions. We find that limitations on microtubule growth phases are needed for realistic dynamics, but the type of limiting mechanism leads to qualitatively different responses to plausible experimental perturbations. We therefore propose and investigate two minimally-complex length-limiting factors: limitation due to resource (tubulin) constraints and limitation due to catastrophe of large-length microtubules. We combine simulations of a detailed stochastic model with steady-state analysis of a mean-field ordinary differential equations model to map out qualitatively distinct parameter regimes. This provides a basis for predicting changes in microtubule dynamics, tubulin allocation, and the turnover rate of tubulin within microtubules in different experimental environments.

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来源期刊
CiteScore
3.90
自引率
8.60%
发文量
123
审稿时长
7.5 months
期刊介绍: The Bulletin of Mathematical Biology, the official journal of the Society for Mathematical Biology, disseminates original research findings and other information relevant to the interface of biology and the mathematical sciences. Contributions should have relevance to both fields. In order to accommodate the broad scope of new developments, the journal accepts a variety of contributions, including: Original research articles focused on new biological insights gained with the help of tools from the mathematical sciences or new mathematical tools and methods with demonstrated applicability to biological investigations Research in mathematical biology education Reviews Commentaries Perspectives, and contributions that discuss issues important to the profession All contributions are peer-reviewed.
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