废水肠道微生物组与社区肥胖率之间的关系:用于监测的潜在微生物生物标志物

Jiangping Wu , Yan Chen , Jiawei Zhao , Tanjila Alam Prosun , Jake William O'Brien , Lachlan Coin , Faisal I. Hai , Martina Sanderson-Smith , Peng Bi , Guangming Jiang
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引用次数: 0

摘要

肠道微生物对人体健康至关重要,通常会在城市污水系统中积累。研究人员选择了澳大利亚人口肥胖率在 18% 至 33% 之间的七家污水处理厂进行废水采样和分析。利用元基因组测序技术检测人类肠道微生物组,研究它们与社区肥胖率的关系。为了揭示这种复杂的关系,采用了一系列算法模型,包括线性判别分析效应大小(LEfSe)、相似性百分比分析(SIMPER)、元基因组图谱统计分析(STAMP)、用于微阵列和 RNA-Seq 数据分析的线性模型(LIMMA)、Relief、RAIDA)、最小绝对收缩和选择算子(LASSO)、支持向量机(SVM)、Boruta、DESeq2 和带偏差校正的微生物组组成分析(ANCOM-BC)等算法模型,用于识别废水微生物组中潜在的肥胖细菌生物标志物。在这些算法模型中,LEfSe、LIMMA、SIMPER 和 SVM 能有效识别多种微生物生物标志物。特定的人类肠道微生物,包括 Ruminococcus_E、Agathobacter、Fusicatenibacter、Anaerobutyricum、Blautia_A 和 Neisseria,被确定为人群肥胖的潜在共识微生物生物标志物。高肥胖率的主要特征是致病细菌和微生物的大量存在,这些细菌和微生物与异生物的生物降解和代谢、内分泌和代谢疾病以及转录途径有关。这项研究强调了利用废水中的人类肠道微生物作为生物标志物监测整个社区肥胖水平的创新潜力,为公共卫生监测提供了一种新颖、经济高效的间接方法。
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Associations between wastewater gut microbiome and community obesity rates: Potential microbial biomarkers for surveillance

Gut microbes are crucial for human health, which are usually accumulated in urban wastewater systems. Seven wastewater treatment plants in Australia with distinct population obesity rates between 18% and 33% were selected for wastewater sampling and analysis. Human gut microbiome were detected using metagenomic sequencing to investigate their associations with the community obesity rate. To unravel this complex relationship, a range of algorithm models, including linear discriminant analysis effect size (LEfSe), similarity percentage analysis (SIMPER), statistical analysis of metagenomic profiles (STAMP), linear models for microarray and RNA-Seq data analysis (LIMMA), Relief, ratio approach for identifying differential abundance (RAIDA), least absolute shrinkage and selection operator (LASSO), support vector machine (SVM), Boruta, DESeq2 and analysis of compositions of microbiomes with bias correction (ANCOM-BC), were used to identify potential bacterial biomarkers for obesity in the wastewater microbiome. Among these algorithm models, LEfSe, LIMMA, SIMPER and SVM are effective in identifying multiple microbial biomarkers. Specific human gut microbes, including Ruminococcus_E, Agathobacter, Fusicatenibacter, Anaerobutyricum, Blautia_A and Neisseria, were identified as potential consensus microbial biomarkers for obesity in the population. A high obesity rate is mainly characterized by a high abundance of pathogenic bacteria and microorganisms associated with xenobiotic biodegradation and metabolism, endocrine and metabolic diseases, and transcription pathways. This study underscores the innovative potential of leveraging human gut microbes in wastewater as biomarkers for monitoring obesity levels across communities, offering a novel, cost-effective, and indirect approach to public health surveillance.

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