基于记忆 CD4+ T 细胞相关基因的肺腺癌预后模型构建及其在免疫疗法中的应用。

IF 3.1 3区 医学 Q2 PHARMACOLOGY & PHARMACY CPT: Pharmacometrics & Systems Pharmacology Pub Date : 2024-04-09 DOI:10.1002/psp4.13122
Yong Li, Xiangli Ye, Huiqin Huang, Rongxiang Cao, Feijian Huang, Limin Chen
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引用次数: 0

摘要

记忆性 CD4+ T 细胞与癌症预后的关系日益得到认可,但它们对肺腺癌(LUAD)预后的影响仍不清楚。在本研究中,我们利用通过估计 RNA 转录本的相对子集来识别细胞类型的算法,分析了免疫细胞的组成和 LUAD 患者的生存情况。加权基因共表达网络分析有助于识别记忆 CD4+ T 细胞相关基因模块。结合模块基因,我们通过回归分析构建了五基因LUAD预后风险模型(HOXB7、MELTF、ABCC2、GNPNAT1和LDHA)。该模型利用 GSE31210 数据集进行了验证。验证结果表明该风险评分模型具有极佳的预测性能。对 LUAD 样本的临床信息和风险评分进行了相关性分析,结果显示疾病进展的 LUAD 患者风险评分更高。此外,单变量和多变量回归分析表明了该模型的独立预后能力。构建的提名图结果表明,提名图的预测性能优于预后模型,且优于单个临床因素。对不同风险评分组进行了免疫景观评估比较。结果显示,免疫浸润较高的低风险组预后较好。低风险组还显示出免疫疗法的潜在益处。我们的研究提出了一个记忆 CD4+ T 细胞相关基因风险模型,作为 LUAD 患者个性化治疗的可靠预后生物标志物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Construction of a prognostic model based on memory CD4+ T cell–associated genes for lung adenocarcinoma and its applications in immunotherapy

The association between memory CD4+ T cells and cancer prognosis is increasingly recognized, but their impact on lung adenocarcinoma (LUAD) prognosis remains unclear. In this study, using the cell-type identification by estimating relative subsets of RNA transcripts algorithm, we analyzed immune cell composition and patient survival in LUAD. Weighted gene coexpression network analysis helped identify memory CD4+ T cell–associated gene modules. Combined with module genes, a five-gene LUAD prognostic risk model (HOXB7, MELTF, ABCC2, GNPNAT1, and LDHA) was constructed by regression analysis. The model was validated using the GSE31210 data set. The validation results demonstrated excellent predictive performance of the risk scoring model. Correlation analysis was conducted between the clinical information and risk scores of LUAD samples, revealing that LUAD patients with disease progression exhibited higher risk scores. Furthermore, univariate and multivariate regression analyses demonstrated the model independent prognostic capability. The constructed nomogram results demonstrated that the predictive performance of the nomogram was superior to the prognostic model and outperformed individual clinical factors. Immune landscape assessment was performed to compare different risk score groups. The results revealed a better prognosis in the low-risk group with higher immune infiltration. The low-risk group also showed potential benefits from immunotherapy. Our study proposes a memory CD4+ T cell–associated gene risk model as a reliable prognostic biomarker for personalized treatment in LUAD patients.

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来源期刊
CiteScore
5.00
自引率
11.40%
发文量
146
审稿时长
8 weeks
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