检测土壤中自由生活线虫结构变化的简单、廉价和快速方法

IF 1.1 4区 生物学 Q4 PARASITOLOGY Helminthologia Pub Date : 2024-04-23 DOI:10.2478/helm-2024-0001
F. Semprucci, L. Catani, E. Grassi, M. Jakubcsiková, A. Čerevková
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引用次数: 0

摘要

摘要 以线虫为基础进行生态调查的一个普遍局限性是,物种的分类鉴定既困难又费时。因此,线虫学家们正投入大量精力开发替代方法,以作为生物监测评估的代用指标。最近,有人提出了一种结合形态功能特征的替代方法,用于检测海洋线虫群的变化。鉴于该方法取得了可喜的成果,我们对该方法进行了测试,以记录土壤中自由生活线虫和植物寄生线虫的分类结构变化。具体来说,这一尝试使用了三个数据集,包括来自欧洲不同地区和不同类型生态系统的研究:森林、草地和玉米作物。多元统计分析显示,将四种性状(即颊腔角质化发生率、两侧窝的大小和形状、角质层和咽部的形态)简单地组合在一个单一的代码中,就能完美地反映出线虫种属级的分类结构趋势。因此,我们预测,通过直接对线虫标本的选定性状进行编码,也能获得类似的结果。
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Simple, inexpensive, and rapid approach to detect changes in the structure of soil free-living nematodes
Summary A general limitation of ecological investigations based on nematodes is related to the difficult and time-consuming taxonomic identification of species. Therefore, nematologists are investing many efforts to develop alternative approaches as proxies applicable in biomonitoring assessment. Recently, an alternative method that combines morpho-functional traits was proposed for detecting assemblage changes of marine nematodes. In view of the promising results, it was tested the same approach to document taxonomic structure changes of soil free-living and plant parasitic nematodes. Specifically, this attempt was carried out using three data sets that include studies from various European regions and different types of ecosystems: forests, grasslands and maize crops. Multivariate statistical analysis revealed that the simple combination of the four traits (i.e., buccal cavity cuticularization occurrence, amphideal fovea size and shape, morphology of the cuticle and pharynx) in a single code number perfectly mirrors the taxonomic structure trends of the nematode assemblage at genus level. Therefore, we predict that similar results can be also obtained by directly encoding nematode specimens with the selected traits and we point to new important advances if this procedure can be coupled with advanced machine learning.
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来源期刊
Helminthologia
Helminthologia 生物-动物学
CiteScore
1.80
自引率
0.00%
发文量
21
审稿时长
>12 weeks
期刊介绍: Helminthologia (HELMIN), published continuously since 1959, is the only journal in Europe that encompasses the individual and collaborative efforts of scientists working on a different topics of human, veterinary and plant helminthology. The journal responsibility is to enrich the theoretical and practical knowledge in very specific areas and thus contribute to the advancements in human and veterinary medicine and agronomy. Taking the advantage of comprehensive and multidisciplinary approaches journal still maintains its original spirit and is principal source of fresh scientific information regarding helminths, endoparasites and plant parasites. Addressing the most up-to date topics journal gained rightful and exceptional place next to the other high-quality scientific journals publishing in its field.
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