开发一步法多重反转录聚合酶链反应和 Luminex xTAG 分析法,用于同时检测甜菜黄化病毒感染情况

IF 2.3 3区 农林科学 Q1 AGRONOMY Plant Pathology Pub Date : 2024-04-26 DOI:10.1111/ppa.13911
Sharella Schop, Floor van den Ham, Ellen van Oorschot, Sander R. Grapendaal, Elma Raaijmakers, Rene A. A. van der Vlugt
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引用次数: 0

摘要

由于杀虫剂使用的限制和气候变化,黄化病毒对甜菜种植的威胁越来越大。病毒检测、监测和抗性育种是确保甜菜未来高产的关键。本研究设计了一种一步法多重反转录(mRT)-PCR 方法,可同时检测甜菜轻度黄化病毒、甜菜萎黄病病毒、甜菜黄化病病毒(BYV)、甜菜花叶病毒和芜菁黄化病病毒。作为后续方法,增加了 Luminex xTAG 阵列技术,以提高检测的特异性。一步式 mRT-PCR 在 22 个单一病毒感染和混合病毒感染的田间样本上进行了评估。xTAG 分析法在单倍和多倍检测中都能达到预期效果,但在多倍检测中需要对 BYV 检测进行优化。由于 Luminex xTAG 检测法特异性强,而且有可能增加检测目标的数量,因此它将成为未来检测甜菜黄化病毒的绝佳方法。
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Development of a one‐step multiplex reverse transcription‐polymerase chain reaction and Luminex xTAG assay for the simultaneous detection of yellowing viruses infecting sugar beet
Yellowing viruses are an increasing threat to sugar beet cultivation, due to limitations on insecticide usage and climate change. Virus detection, monitoring and resistance breeding are key to secure high sugar beet yields in the future. For this research, a one‐step multiplex reverse transcription (mRT)‐PCR method was designed to detect simultaneously beet mild yellowing virus, beet chlorosis virus, beet yellows virus (BYV), beet mosaic virus and turnip yellows virus. The addition of Luminex xTAG array technology was used as a follow‐up method to increase assay specificity. The one‐step mRT‐PCR was evaluated on 22 field samples with single and mixed virus infections. The xTAG assay works as expected both in a simplex and multiplex setting, except that BYV detection needs optimization in the multiplex setting. In the future, the Luminex xTAG assay would be an excellent method for the detection of beet yellowing viruses due to its high specificity and the potential to increase the number of targets.
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来源期刊
Plant Pathology
Plant Pathology 生物-农艺学
CiteScore
5.60
自引率
7.40%
发文量
147
审稿时长
3 months
期刊介绍: This international journal, owned and edited by the British Society for Plant Pathology, covers all aspects of plant pathology and reaches subscribers in 80 countries. Top quality original research papers and critical reviews from around the world cover: diseases of temperate and tropical plants caused by fungi, bacteria, viruses, phytoplasmas and nematodes; physiological, biochemical, molecular, ecological, genetic and economic aspects of plant pathology; disease epidemiology and modelling; disease appraisal and crop loss assessment; and plant disease control and disease-related crop management.
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