环形扩展的抗霉素类去肽的工程生物合成和抗癌研究

IF 3.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS ACS Synthetic Biology Pub Date : 2024-04-28 DOI:10.1021/acssynbio.4c00193
Zhijuan Hu*, Di Gu, Will Skyrud, Yongle Du, Rui Zhai, Juan Wang and Wenjun Zhang*, 
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引用次数: 0

摘要

Respirantins 是由链霉菌(Streptomyces sp.然而,由于天然生产者的滴度较低,而且其结构复杂,化学合成具有挑战性,因此阻碍了进一步的研究。此前,根据对四种抗霉素类去肽的生物信息学比较,提出了 respirantin 的生物合成基因簇(BGC)。在本研究中,我们首次成功地利用合成的 BGC 在白链霉菌中重组了 respirantin。这种异源系统是生产呼吸素并使其多样化的一个可利用平台。通过多酮合成酶途径工程、生物催化和化学衍生,我们生成了九种呼吸素化合物,其中包括六种新的衍生物。针对人类 MCF-7 和 Hela 癌细胞株的细胞毒性筛选显示,respirantin 具有独特的双相剂量反应特征。此外,结构-活性关系研究还阐明了导致其显著细胞毒性的基本官能团。这项研究为基于 respirantin 的抗癌药物的发现和开发铺平了道路。
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Engineered Biosynthesis and Anticancer Studies of Ring-Expanded Antimycin-Type Depsipeptides

Respirantins are 18-membered antimycin-type depsipeptides produced by Streptomyces sp. and Kitasatospora sp. These compounds have shown extraordinary anticancer activities against a panel of cancer cell lines with nanomolar levels of IC50 values. However, further investigation has been impeded by the low titers of the natural producers and the challenging chemical synthesis due to their structural complexity. The biosynthetic gene cluster (BGC) of respirantin was previously proposed based on a bioinformatic comparison of the four members of antimycin-type depsipeptides. In this study, we report the first successful reconstitution of respirantin in Streptomyces albus using a synthetic BGC. This heterologous system serves as an accessible platform for the production and diversification of respirantins. Through polyketide synthase pathway engineering, biocatalysis, and chemical derivatization, we generated nine respirantin compounds, including six new derivatives. Cytotoxicity screening against human MCF-7 and Hela cancer cell lines revealed a unique biphasic dose–response profile of respirantin. Furthermore, a structure–activity relationship study has elucidated the essential functional groups that contribute to its remarkable cytotoxicity. This work paves the way for respirantin-based anticancer drug discovery and development.

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来源期刊
CiteScore
8.00
自引率
10.60%
发文量
380
审稿时长
6-12 weeks
期刊介绍: The journal is particularly interested in studies on the design and synthesis of new genetic circuits and gene products; computational methods in the design of systems; and integrative applied approaches to understanding disease and metabolism. Topics may include, but are not limited to: Design and optimization of genetic systems Genetic circuit design and their principles for their organization into programs Computational methods to aid the design of genetic systems Experimental methods to quantify genetic parts, circuits, and metabolic fluxes Genetic parts libraries: their creation, analysis, and ontological representation Protein engineering including computational design Metabolic engineering and cellular manufacturing, including biomass conversion Natural product access, engineering, and production Creative and innovative applications of cellular programming Medical applications, tissue engineering, and the programming of therapeutic cells Minimal cell design and construction Genomics and genome replacement strategies Viral engineering Automated and robotic assembly platforms for synthetic biology DNA synthesis methodologies Metagenomics and synthetic metagenomic analysis Bioinformatics applied to gene discovery, chemoinformatics, and pathway construction Gene optimization Methods for genome-scale measurements of transcription and metabolomics Systems biology and methods to integrate multiple data sources in vitro and cell-free synthetic biology and molecular programming Nucleic acid engineering.
期刊最新文献
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