参数可识别性方法的导航:模型开发工作流程建议。

IF 3.1 3区 医学 Q2 PHARMACOLOGY & PHARMACY CPT: Pharmacometrics & Systems Pharmacology Pub Date : 2024-05-07 DOI:10.1002/psp4.13148
Martijn van Noort, Martijn Ruppert, Joost DeJongh, Eleonora Marostica, Rolien Bosch, Emir Mešić, Nelleke Snelder
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引用次数: 0

摘要

在药效计量学建模中,了解数据是否足够丰富以确定拟议模型的参数往往非常重要。虽然可以根据模型拟合结果进行评估,但通常很难将可识别性问题与其他模型拟合和数值问题区分开来。此外,事先确定可识别性也很有价值。本文比较了四种参数可识别性方法,即系统可识别性微分代数法(DAISY)、灵敏度矩阵法(SMM)、差分法(Aliasing)和费雪信息矩阵法(FIMM)。我们讨论了这些方法的特点,并将它们应用于一系列应用中,这些应用包括常用的 PK 模型结构、合适的给药方案和采样时间。选择这些应用是为了验证这些方法并证明它们的实用性。虽然传统的可识别性分析提供的是分类结果[PLoS One,6,2011,e27755;CPT Pharmacometrics Syst Pharmacol,8,2019,259;Bioinformatics,30,2014,1440],但我们认为,在实践中,连续量表能更好地反映数据的局限性,信息量更大。这些方法对应用的评价基本一致。费雪信息矩阵法似乎提供了最一致的答案。所有方法都提供了无法识别的参数信息。有些结果出乎意料,表明在没有预见到的情况下出现了可识别性问题,但在进一步分 析后可以得到解释。这说明可识别性评估是有用的。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Navigating the landscape of parameter identifiability methods: A workflow recommendation for model development

In pharmacometric modeling, it is often important to know whether the data is sufficiently rich to identify the parameters of a proposed model. While it may be possible to assess this based on the results of a model fit, it is often difficult to disentangle identifiability issues from other model fitting and numerical problems. Furthermore, it can be of value to ascertain identifiability beforehand. This paper compares four methods for parameter identifiability, namely Differential Algebra for Identifiability of SYstems (DAISY), the sensitivity matrix method (SMM), Aliasing, and the Fisher information matrix method (FIMM). We discuss the characteristics of the methods and apply them to a set of applications, consisting of frequently used PK model structures, with suitable dosing regimens and sampling times. These applications were selected to validate the methods and demonstrate their usefulness. While traditional identifiability analysis provides a categorical result [PLoS One, 6, 2011, e27755; CPT Pharmacometrics Syst Pharmacol, 8, 2019, 259; Bioinformatics, 30, 2014, 1440], we argue that in practice a continuous scale better reflects the limitations on the data and is more informative. The methods were generally consistent in their evaluation of the applications. The Fisher information matrix method seemed to provide the most consistent answers. All methods provided information on the parameters that were unidentifiable. Some of the results were unexpected, indicating identifiability issues where none were foreseen, but could be explained upon further analysis. This illustrated the usefulness of identifiability assessment.

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来源期刊
CiteScore
5.00
自引率
11.40%
发文量
146
审稿时长
8 weeks
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