Samhita Bhaumik , Alekhya Sarkar , Sudhan Debnath , Bimal Debnath , Rajat Ghosh , Magdi E.A. Zaki , Sami A. Al-Hussain
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Finally, in silico results were validated by <em>in vitro</em> analysis using <em>n</em>-butanol fraction of crude methanol extracts.</p></div><div><h3>Results</h3><p>The XP glide scores of top seven hits OI_13, OI_66, OI_16, OI_44, OI_43, OI_20, OI_78 and acarbose were –14.261, –13.475, –13.074, –13.045, –12.978, –12.659, –12.354 and –12.296 kcal/mol, respectively. These hits demonstrated excellent binding affinity towards AG, surpassing the known AG inhibitor acarbose. The MM-GBSA dG binding energies of OI_13, OI_66, and acarbose were −69.093, −62.950, and −53.055 kcal/mol, respectively. Most of the top hits were glycosides, indicating that active compounds lie in the <em>n</em>-butanol fraction of the extract. The IC<sub>50</sub> value for AG inhibition by <em>n</em>-butanol fraction was 248.1 μg/ml, and for that of pure acarbose it was 89.16 μg/ml. The predicted oral absorption rate in humans for the top seven hits was low like acarbose, which favors the use of these compounds as anti-diabetes in the small intestine.</p></div><div><h3>Conclusion</h3><p>In summary, the study provides promising insights into the use of natural compounds derived from <em>O. indicum</em> as potential AG inhibitors to manage diabetes. 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Finally, in silico results were validated by <em>in vitro</em> analysis using <em>n</em>-butanol fraction of crude methanol extracts.</p></div><div><h3>Results</h3><p>The XP glide scores of top seven hits OI_13, OI_66, OI_16, OI_44, OI_43, OI_20, OI_78 and acarbose were –14.261, –13.475, –13.074, –13.045, –12.978, –12.659, –12.354 and –12.296 kcal/mol, respectively. These hits demonstrated excellent binding affinity towards AG, surpassing the known AG inhibitor acarbose. The MM-GBSA dG binding energies of OI_13, OI_66, and acarbose were −69.093, −62.950, and −53.055 kcal/mol, respectively. Most of the top hits were glycosides, indicating that active compounds lie in the <em>n</em>-butanol fraction of the extract. The IC<sub>50</sub> value for AG inhibition by <em>n</em>-butanol fraction was 248.1 μg/ml, and for that of pure acarbose it was 89.16 μg/ml. 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引用次数: 0
摘要
背景据国际糖尿病联合会预测,到 2030 年,全球将有 5.78 亿人患有糖尿病,到 2045 年将达到 7 亿人。α-葡萄糖苷酶(AG)是抗击糖尿病的有望药物靶点之一,其抑制剂可通过减少复杂碳水化合物分解为单糖来控制糖尿病。本研究旨在从天然资源中鉴定和验证潜在的 AG 抑制剂,以防治糖尿病。方法采用基于结构的虚拟筛选和分子动力学模拟等计算技术,从 Oroxylum indicum 的化合物中预测潜在的 AG 抑制剂。最后,利用甲醇粗提取物的正丁醇馏分进行体外分析,验证硅学结果。结果OI_13、OI_66、OI_16、OI_44、OI_43、OI_20、OI_78和阿卡波糖的XP滑翔得分分别为-14.261、-13.475、-13.074、-13.045、-12.978、-12.659、-12.354和-12.296 kcal/mol。这些化合物与 AG 的结合亲和力极佳,超过了已知的 AG 抑制剂阿卡波糖。OI_13、OI_66和阿卡波糖的MM-GBSA dG结合能分别为-69.093、-62.950和-53.055 kcal/mol。命中率最高的大部分是苷类化合物,表明活性化合物存在于提取物的正丁醇馏分中。正丁醇馏分抑制 AG 的 IC50 值为 248.1 μg/ml,纯阿卡波糖的 IC50 值为 89.16 μg/ml。与阿卡波糖一样,前七种化合物的预测人体口服吸收率较低,这有利于这些化合物在小肠中作为抗糖尿病药物使用。然而,在临床使用之前,有必要开展进一步的研究,包括临床试验和药理学研究,以验证其有效性和安全性。
α-Glucosidase inhibitory potential of Oroxylum indicum using molecular docking, molecular dynamics, and in vitro evaluation
Background
According to the International Diabetes Federation, there will be 578 million individuals worldwide with diabetes by 2030 and 700 million by 2045. One of the promising drug targets to fight diabetes is α-glucosidase (AG), and its inhibitors may be used to manage diabetes by reducing the breakdown of complex carbohydrates into simple sugars. The study aims to identify and validate potential AG inhibitors in natural sources to combat diabetes.
Methods
Computational techniques such as structure-based virtual screening and molecular dyncamic simulation were employed to predict potential AG inhibitors from compounds of Oroxylum indicum. Finally, in silico results were validated by in vitro analysis using n-butanol fraction of crude methanol extracts.
Results
The XP glide scores of top seven hits OI_13, OI_66, OI_16, OI_44, OI_43, OI_20, OI_78 and acarbose were –14.261, –13.475, –13.074, –13.045, –12.978, –12.659, –12.354 and –12.296 kcal/mol, respectively. These hits demonstrated excellent binding affinity towards AG, surpassing the known AG inhibitor acarbose. The MM-GBSA dG binding energies of OI_13, OI_66, and acarbose were −69.093, −62.950, and −53.055 kcal/mol, respectively. Most of the top hits were glycosides, indicating that active compounds lie in the n-butanol fraction of the extract. The IC50 value for AG inhibition by n-butanol fraction was 248.1 μg/ml, and for that of pure acarbose it was 89.16 μg/ml. The predicted oral absorption rate in humans for the top seven hits was low like acarbose, which favors the use of these compounds as anti-diabetes in the small intestine.
Conclusion
In summary, the study provides promising insights into the use of natural compounds derived from O. indicum as potential AG inhibitors to manage diabetes. However, further research, including clinical trials and pharmacological studies, would be necessary to validate their efficacy and safety before clinical use.
期刊介绍:
The Saudi Pharmaceutical Journal (SPJ) is the official journal of the Saudi Pharmaceutical Society (SPS) publishing high quality clinically oriented submissions which encompass the various disciplines of pharmaceutical sciences and related subjects. SPJ publishes 8 issues per year by the Saudi Pharmaceutical Society, with the cooperation of the College of Pharmacy, King Saud University.