基于中性粒细胞相关基因的肺鳞癌预后特征预测揭示了免疫格局和候选药物

Du Sili, Zhang Nan
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引用次数: 0

摘要

未分配:背景:由于肺鳞状细胞癌的预后普遍较差,因此迫切需要创新新的预后生物标志物和治疗靶点,以改善患者的预后。研究目标我们的目标是开发一种与中性粒细胞相关的新型多基因预后模型,用于预测肺鳞癌的预后。方法我们利用癌症基因组图谱数据库中肺鳞状细胞癌患者的信使 RNA 表达谱和相关临床数据。通过 K-均值聚类、最小绝对收缩和选择算子回归以及单变量/多变量 Cox 回归分析,我们确定了与患者生存密切相关的 12 个中性粒细胞相关基因,并构建了一个预后模型。我们在癌症基因组图谱数据库和基因表达总括验证集中验证了该模型的稳定性,证明了该模型稳健的预测性能。结果免疫浸润分析表明,与低风险组相比,高风险组的自然杀伤细胞和单核细胞浸润水平明显升高,而巨噬细胞在高风险组的浸润水平要低得多。大多数免疫检查点基因,包括程序性细胞死亡蛋白1和细胞毒性T淋巴细胞相关抗原4,在高风险组中都表现出较高的表达水平。肿瘤免疫功能障碍和排斥评分以及免疫表观评分结果表明,"RIC "版 V2 修订版高风险组可能倾向于免疫疗法。此外,CellMiner 数据库的预测结果显示,药物敏感性(如长春瑞滨和 PKI-587)与预后基因之间存在很大的相关性。结论总之,我们的研究建立了一个可靠的预后风险模型,该模型在预测肺鳞癌患者的总体生存期方面具有重要价值,并可指导个性化治疗策略。(Rev Invest Clin.2024;76(2):116-31).
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Prediction of Prognostic Features Based on Neutrophil-Related Genes for Lung Squamous Cell Carcinoma Reveals Immune Landscape and Drug Candidates.

Unassigned: Background: Since to the prognosis of lung squamous cell carcinoma is generally poor, there is an urgent need to innovate new prognostic biomarkers and therapeutic targets to improve patient outcomes. Objectives: Our goal was to develop a novel multi-gene prognostic model linked to neutrophils for predicting lung squamous cell carcinoma prognosis. Methods: We utilized messenger RNA expression profiles and relevant clinical data of lung squamous cell carcinoma patients from the Cancer Genome Atlas database. Through K-means clustering, least absolute shrinkage and selection operator regression, and univariate/multivariate Cox regression analyses, we identified 12 neutrophil-related genes strongly related to patient survival and constructed a prognostic model. We verified the stability of the model in the Cancer Genome Atlas database and gene expression omnibus validation set, demonstrating the robust predictive performance of the model. Results: Immunoinfiltration analysis revealed remarkably elevated levels of infiltration for natural killer cells resting and monocytes in the high-risk group compared to the low-risk group, while macrophages had considerably lower infiltration in the high risk group. Most immune checkpoint genes, including programmed cell death protein 1 and cytotoxic T-lymphocyte-associated antigen 4, exhibited high expression levels in the high risk group. Tumor immune dysfunction and exclusion scores and immunophenoscore results suggested a potential inclination toward immunotherapy in the "RIC" version V2 revised high risk group. Moreover, prediction results from the CellMiner database revealed great correlations between drug sensitivity (e.g., Vinorelbine and PKI-587) and prognostic genes. Conclusion: Overall, our study established a reliable prognostic risk model that possessed significant value in predicting the overall survival of lung squamous cell carcinoma patients and may guide personalized treatment strategies. (Rev Invest Clin. 2024;76(2):116-31).

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来源期刊
CiteScore
3.00
自引率
0.00%
发文量
60
审稿时长
>12 weeks
期刊介绍: The Revista de Investigación Clínica – Clinical and Translational Investigation (RIC-C&TI), publishes original clinical and biomedical research of interest to physicians in internal medicine, surgery, and any of their specialties. The Revista de Investigación Clínica – Clinical and Translational Investigation is the official journal of the National Institutes of Health of Mexico, which comprises a group of Institutes and High Specialty Hospitals belonging to the Ministery of Health. The journal is published both on-line and in printed version, appears bimonthly and publishes peer-reviewed original research articles as well as brief and in-depth reviews. All articles published are open access and can be immediately and permanently free for everyone to read and download. The journal accepts clinical and molecular research articles, short reports and reviews. Types of manuscripts: – Brief Communications – Research Letters – Original Articles – Brief Reviews – In-depth Reviews – Perspectives – Letters to the Editor
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