Alejandra Puentes-Sayo, Julian F. Quintero-Galvis, Nestor H. Campos, Arturo Acero P, Juan Carlos Narváez-Barandica
{"title":"加勒比海西南部常见章鱼(Octopus insularis)的遗传连通性","authors":"Alejandra Puentes-Sayo, Julian F. Quintero-Galvis, Nestor H. Campos, Arturo Acero P, Juan Carlos Narváez-Barandica","doi":"10.1111/maec.12809","DOIUrl":null,"url":null,"abstract":"<p><i>Octopus insularis</i> is a shallow-water octopus distributed throughout the western Atlantic, the Gulf of Mexico and the Caribbean. To evaluate its phylogeographic pattern, mitochondrial markers (16S rRNA and COIII) and genome-wide nuclear markers (SNP's) were analyzed in individuals from artisanal fishing in different locations of the Colombian Caribbean coast. Mitochondrial analyzes displayed novel haplotypes (16S = H2, H3 and H4; COIII = H2–H7) and haplotypes shared with distant geographic areas (16S = H1 COIII = H1). The COIII gene did not show genetic differentiation between the analyzed localities, while the 16S gene showed significant differences between Santa Marta and Isla Fuerte. COIII's demographic analysis indicated that the species' effective population size has remained constant. Inferences were made from next-generation genomic data with restriction site-associated DNA (ddRAD-seq) and 6769 polymorphic loci. The pairwise <i>F</i><sub>ST</sub> test indicated that there are low but significant differences between localities; however, the general molecular analysis of variance (AMOVA) and the principal coordinate analysis showed a lack of spatial structure in the populations analyzed. The Mantel test found no correlation between genetic distance and geographic distance, and the genetic structure analyses showed the presence of one genetic stock. The information obtained in this study indicates the genetic connectivity of <i>O. insularis</i> in the southwestern Caribbean, the absence of putative biogeographic barriers that affect its gene flow, and the crucial role played by life history strategies (planktonic paralarvae) and oceanographic factors to define the current distribution of its genetic diversity in this region.</p>","PeriodicalId":49883,"journal":{"name":"Marine Ecology-An Evolutionary Perspective","volume":"45 4","pages":""},"PeriodicalIF":1.5000,"publicationDate":"2024-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic connectivity of the common octopus (Octopus insularis) along the southwestern Caribbean\",\"authors\":\"Alejandra Puentes-Sayo, Julian F. Quintero-Galvis, Nestor H. Campos, Arturo Acero P, Juan Carlos Narváez-Barandica\",\"doi\":\"10.1111/maec.12809\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><i>Octopus insularis</i> is a shallow-water octopus distributed throughout the western Atlantic, the Gulf of Mexico and the Caribbean. To evaluate its phylogeographic pattern, mitochondrial markers (16S rRNA and COIII) and genome-wide nuclear markers (SNP's) were analyzed in individuals from artisanal fishing in different locations of the Colombian Caribbean coast. Mitochondrial analyzes displayed novel haplotypes (16S = H2, H3 and H4; COIII = H2–H7) and haplotypes shared with distant geographic areas (16S = H1 COIII = H1). The COIII gene did not show genetic differentiation between the analyzed localities, while the 16S gene showed significant differences between Santa Marta and Isla Fuerte. COIII's demographic analysis indicated that the species' effective population size has remained constant. Inferences were made from next-generation genomic data with restriction site-associated DNA (ddRAD-seq) and 6769 polymorphic loci. The pairwise <i>F</i><sub>ST</sub> test indicated that there are low but significant differences between localities; however, the general molecular analysis of variance (AMOVA) and the principal coordinate analysis showed a lack of spatial structure in the populations analyzed. The Mantel test found no correlation between genetic distance and geographic distance, and the genetic structure analyses showed the presence of one genetic stock. The information obtained in this study indicates the genetic connectivity of <i>O. insularis</i> in the southwestern Caribbean, the absence of putative biogeographic barriers that affect its gene flow, and the crucial role played by life history strategies (planktonic paralarvae) and oceanographic factors to define the current distribution of its genetic diversity in this region.</p>\",\"PeriodicalId\":49883,\"journal\":{\"name\":\"Marine Ecology-An Evolutionary Perspective\",\"volume\":\"45 4\",\"pages\":\"\"},\"PeriodicalIF\":1.5000,\"publicationDate\":\"2024-05-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Marine Ecology-An Evolutionary Perspective\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/maec.12809\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"MARINE & FRESHWATER BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Marine Ecology-An Evolutionary Perspective","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/maec.12809","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MARINE & FRESHWATER BIOLOGY","Score":null,"Total":0}
Genetic connectivity of the common octopus (Octopus insularis) along the southwestern Caribbean
Octopus insularis is a shallow-water octopus distributed throughout the western Atlantic, the Gulf of Mexico and the Caribbean. To evaluate its phylogeographic pattern, mitochondrial markers (16S rRNA and COIII) and genome-wide nuclear markers (SNP's) were analyzed in individuals from artisanal fishing in different locations of the Colombian Caribbean coast. Mitochondrial analyzes displayed novel haplotypes (16S = H2, H3 and H4; COIII = H2–H7) and haplotypes shared with distant geographic areas (16S = H1 COIII = H1). The COIII gene did not show genetic differentiation between the analyzed localities, while the 16S gene showed significant differences between Santa Marta and Isla Fuerte. COIII's demographic analysis indicated that the species' effective population size has remained constant. Inferences were made from next-generation genomic data with restriction site-associated DNA (ddRAD-seq) and 6769 polymorphic loci. The pairwise FST test indicated that there are low but significant differences between localities; however, the general molecular analysis of variance (AMOVA) and the principal coordinate analysis showed a lack of spatial structure in the populations analyzed. The Mantel test found no correlation between genetic distance and geographic distance, and the genetic structure analyses showed the presence of one genetic stock. The information obtained in this study indicates the genetic connectivity of O. insularis in the southwestern Caribbean, the absence of putative biogeographic barriers that affect its gene flow, and the crucial role played by life history strategies (planktonic paralarvae) and oceanographic factors to define the current distribution of its genetic diversity in this region.
期刊介绍:
Marine Ecology publishes original contributions on the structure and dynamics of marine benthic and pelagic ecosystems, communities and populations, and on the critical links between ecology and the evolution of marine organisms.
The journal prioritizes contributions elucidating fundamental aspects of species interaction and adaptation to the environment through integration of information from various organizational levels (molecules to ecosystems) and different disciplines (molecular biology, genetics, biochemistry, physiology, marine biology, natural history, geography, oceanography, palaeontology and modelling) as viewed from an ecological perspective. The journal also focuses on population genetic processes, evolution of life histories, morphological traits and behaviour, historical ecology and biogeography, macro-ecology and seascape ecology, palaeo-ecological reconstruction, and ecological changes due to introduction of new biota, human pressure or environmental change.
Most applied marine science, including fisheries biology, aquaculture, natural-products chemistry, toxicology, and local pollution studies lie outside the scope of the journal. Papers should address ecological questions that would be of interest to a worldwide readership of ecologists; papers of mostly local interest, including descriptions of flora and fauna, taxonomic descriptions, and range extensions will not be considered.