利用古 DNA 了解跨越千年的作物种群动态:西班牙大加那利岛考古大麦(Hordeum vulgare L.)案例研究

IF 2.6 1区 地球科学 Q1 ANTHROPOLOGY Journal of Archaeological Science Pub Date : 2024-05-18 DOI:10.1016/j.jas.2024.106001
Jenny Hagenblad , Jacob Morales , Matti W. Leino , Robin Abbey-Lee , Amelia C. Rodríguez-Rodríguez , Jonathan Santana
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引用次数: 0

摘要

陆稻被描述为未改良作物的基因多样化动态种群。然而,由于缺乏合适的考古材料,很少有人对陆地种群在较长时期内的发展进行研究。大加那利岛的本土谷仓提供了一个独特的机会,可以对同一时期的多个标本进行遗传分析,并在多个时间点对同一种群进行采样。在此,我们报告了一项对大麦(Hordeum vulgare L.)的遗传研究,该大麦在 1400 年间被反复采样。我们利用捕获技术成功富集了提取的大麦外显子组 aDNA,并展示了来自 10 个考古样本和 6 个现存样本的测序数据。结果表明,自公元 7 世纪以来,大加那利岛的大麦种群并没有经历任何剧烈的遗传更替或新遗传物质的流入,但种植规模似乎有所变化。在研究期间,我们发现遗传组成的时间变化较小,并认为这些变化反映了适应不断变化的气候和动态农业社会的自然选择。
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Utilising ancient DNA to understand crop population dynamics across a millennium: A case study of archaeological barley (Hordeum vulgare L.) from Gran Canaria, Spain

Landraces are described as genetically diverse, dynamic populations of unimproved crops. However, studying the development of a landrace population over longer periods of time has rarely been done due to a lack of suitable archaeological materials. The indigenous grain silos of Gran Canaria provide a unique opportunity for genetically analysing multiple specimens from the same time period as well as sampling the same population at multiple time points. Here we report a genetic study of a landrace barley (Hordeum vulgare L.) sampled repeatedly over a period of 1400 years. We successfully enriched extracted aDNA for the barley exome using capture techniques and present sequencing data from ten archaeological and six extant samples. The results show that the landrace barley population of Gran Canaria has not undergone any dramatic genetic turnover or influx of new genetic material since the 7th century CE, but that the scale of cultivation seems to have varied. We detect smaller temporal changes of the genetic composition during the studied period and suggest that these changes reflect natural selection for adaptation to a changing climate and a dynamic agricultural society.

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来源期刊
Journal of Archaeological Science
Journal of Archaeological Science 地学-地球科学综合
CiteScore
6.10
自引率
7.10%
发文量
112
审稿时长
49 days
期刊介绍: The Journal of Archaeological Science is aimed at archaeologists and scientists with particular interests in advancing the development and application of scientific techniques and methodologies to all areas of archaeology. This established monthly journal publishes focus articles, original research papers and major review articles, of wide archaeological significance. The journal provides an international forum for archaeologists and scientists from widely different scientific backgrounds who share a common interest in developing and applying scientific methods to inform major debates through improving the quality and reliability of scientific information derived from archaeological research.
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