HCA-DAN:用于三维 CT 图像中胃部肿瘤分割的分层类感知域自适应网络。

IF 3.5 2区 医学 Q2 ONCOLOGY Cancer Imaging Pub Date : 2024-05-21 DOI:10.1186/s40644-024-00711-w
Ning Yuan, Yongtao Zhang, Kuan Lv, Yiyao Liu, Aocai Yang, Pianpian Hu, Hongwei Yu, Xiaowei Han, Xing Guo, Junfeng Li, Tianfu Wang, Baiying Lei, Guolin Ma
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引用次数: 0

摘要

背景:从 CT 扫描中准确分割胃肿瘤可为胃癌的诊断和治疗提供有用的图像信息。然而,从三维 CT 图像中自动分割胃肿瘤面临着一些挑战。各向异性空间分辨率的巨大差异限制了三维卷积神经网络(CNN)学习不同视图特征的能力。胃肿瘤的背景纹理复杂,其大小、形状和强度分布变化很大,这增加了深度学习方法捕捉边界的难度。特别是,虽然多中心数据集增加了样本量和表示能力,但却存在中心间异质性的问题:在这项研究中,我们提出了一种新的跨中心三维肿瘤分割方法,名为 "分层类感知域自适应网络"(HCA-DAN),它包括一个新的三维神经网络,该网络有效地连接了各向异性神经网络和变换器(AsTr),用于从各向异性分辨率的 CT 图像中提取多尺度上下文特征;以及一个分层类感知域对齐(HCADA)模块,该模块通过整合类注意力图谱和类特定信息,自适应地对齐两个域的多尺度上下文特征。我们在从四个医疗中心收集的内部 CT 图像数据集上评估了所提出的方法,并在中心内和跨中心测试场景中验证了其分割性能:与其他三维分割模型相比,我们的基线分割网络(即 AsTr)取得了最佳效果,在四个中心内测试任务中,平均骰子相似系数(DSC)分别为 59.26%、55.97%、48.83% 和 67.28%;在四个跨中心测试任务中,平均骰子相似系数(DSC)分别为 56.42%、55.94%、46.54% 和 60.62%。此外,与其他无监督域适应方法相比,所提出的跨中心分割网络(即 HCA-DAN)取得了优异的成绩,在四个跨中心测试任务中的 DSC 分别为 58.36%、56.72%、49.25% 和 62.20%:综合实验结果表明,在这个多中心数据库中,所提出的方法优于其他方法,有望用于常规临床工作流程。
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HCA-DAN: hierarchical class-aware domain adaptive network for gastric tumor segmentation in 3D CT images.

Background: Accurate segmentation of gastric tumors from CT scans provides useful image information for guiding the diagnosis and treatment of gastric cancer. However, automated gastric tumor segmentation from 3D CT images faces several challenges. The large variation of anisotropic spatial resolution limits the ability of 3D convolutional neural networks (CNNs) to learn features from different views. The background texture of gastric tumor is complex, and its size, shape and intensity distribution are highly variable, which makes it more difficult for deep learning methods to capture the boundary. In particular, while multi-center datasets increase sample size and representation ability, they suffer from inter-center heterogeneity.

Methods: In this study, we propose a new cross-center 3D tumor segmentation method named Hierarchical Class-Aware Domain Adaptive Network (HCA-DAN), which includes a new 3D neural network that efficiently bridges an Anisotropic neural network and a Transformer (AsTr) for extracting multi-scale context features from the CT images with anisotropic resolution, and a hierarchical class-aware domain alignment (HCADA) module for adaptively aligning multi-scale context features across two domains by integrating a class attention map with class-specific information. We evaluate the proposed method on an in-house CT image dataset collected from four medical centers and validate its segmentation performance in both in-center and cross-center test scenarios.

Results: Our baseline segmentation network (i.e., AsTr) achieves best results compared to other 3D segmentation models, with a mean dice similarity coefficient (DSC) of 59.26%, 55.97%, 48.83% and 67.28% in four in-center test tasks, and with a DSC of 56.42%, 55.94%, 46.54% and 60.62% in four cross-center test tasks. In addition, the proposed cross-center segmentation network (i.e., HCA-DAN) obtains excellent results compared to other unsupervised domain adaptation methods, with a DSC of 58.36%, 56.72%, 49.25%, and 62.20% in four cross-center test tasks.

Conclusions: Comprehensive experimental results demonstrate that the proposed method outperforms compared methods on this multi-center database and is promising for routine clinical workflows.

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来源期刊
Cancer Imaging
Cancer Imaging ONCOLOGY-RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
CiteScore
7.00
自引率
0.00%
发文量
66
审稿时长
>12 weeks
期刊介绍: Cancer Imaging is an open access, peer-reviewed journal publishing original articles, reviews and editorials written by expert international radiologists working in oncology. The journal encompasses CT, MR, PET, ultrasound, radionuclide and multimodal imaging in all kinds of malignant tumours, plus new developments, techniques and innovations. Topics of interest include: Breast Imaging Chest Complications of treatment Ear, Nose & Throat Gastrointestinal Hepatobiliary & Pancreatic Imaging biomarkers Interventional Lymphoma Measurement of tumour response Molecular functional imaging Musculoskeletal Neuro oncology Nuclear Medicine Paediatric.
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