用于预测发芽的三角区模型 (TAM):加强热液时间模型应用的方法

IF 5.4 Q1 PLANT SCIENCES Current Plant Biology Pub Date : 2024-05-24 DOI:10.1016/j.cpb.2024.100356
Mostafa Oveisi , Hassan Alizadeh , Sassan A. Lorestani , Aboozar Esmaili , Nasrin Sadeghnejad , Ramin Piri , Jose L. Gonzalez-Andujar , Heinz Müller-Schärer
{"title":"用于预测发芽的三角区模型 (TAM):加强热液时间模型应用的方法","authors":"Mostafa Oveisi ,&nbsp;Hassan Alizadeh ,&nbsp;Sassan A. Lorestani ,&nbsp;Aboozar Esmaili ,&nbsp;Nasrin Sadeghnejad ,&nbsp;Ramin Piri ,&nbsp;Jose L. Gonzalez-Andujar ,&nbsp;Heinz Müller-Schärer","doi":"10.1016/j.cpb.2024.100356","DOIUrl":null,"url":null,"abstract":"<div><p>A thorough examination of assumptions in hydrothermal time models revealed areas for enhancing model performance. We introduce the Triangle Area Model (<em>TAM</em>), which uses the area of right-angled triangles to calculate hydrothermal time for predicting population germination fractions (<em>g</em>). TAM is characterized by its depiction of triangles, considering insightful parameters such as the distance of germination temperature (<em>T</em>) to the base (<em>T</em><sub><em>b</em></sub>), optimal (<em>T</em><sub><em>o</em></sub>), and ceiling (<em>T</em><sub><em>c</em></sub>) temperatures, the range of <em>T</em><sub><em>c</em></sub> – <em>T</em><sub><em>o</em></sub>, <em>T</em><sub><em>o</em></sub> – <em>T</em><sub><em>b</em></sub>, and the germination water potential (<em>Ψ</em>), i.e. mean base water potential (<em>Ψ</em><sub><em>b(g)</em></sub>), along with potential <em>g</em> that may occur with <em>T</em> and <em>Ψ</em> combinations within <em>T</em><sub><em>c</em></sub> – <em>T</em><sub><em>b</em></sub> when <em>Ψ &gt; Ψ</em><sub><em>b(g)</em></sub>. Applied to germination data from <em>Ambrosia psilostachya</em> L., <em>Cynanchum acutum</em> L., and <em>Bidens pilosa</em> L., <em>TAM</em> achieves an <em>RMSE</em> of 0.03 for <em>A. psilostachya</em> and <em>C. acutum</em>, and 0.05 for <em>B. pilosa</em>. Moreover, <em>TAM</em> demonstrates an <em>R</em><sup><em>2</em></sup> of 0.96, 0.97, and 0.98 for the respective species. <em>TAM</em> significantly outperforms earlier models through a comparison with varying <em>T</em> and <em>Ψ</em>. <em>TAM</em> determined <em>T</em><sub><em>b</em></sub> for <em>A. psilostachya</em>, <em>C. acutum</em>, and <em>B. pilosa</em> as 0.19, 14.57, and 5.76 <em>°C</em>; <em>T</em><sub><em>o</em></sub> as 25.1, 39.9, and 29.8 <em>°C</em>; and <em>T</em><sub><em>c</em></sub> as 46.7, 53, and 41<em>°C</em>, for the respective species. It also estimates <em>Ψ</em><sub><em>b(g)</em></sub> as -1<em>.</em>48 for <em>A. psilostachya</em>, -0.98 for <em>C. acutum</em>, and -0.97 for <em>B. pilosa</em>. The <em>TAM</em> approach deepens our understanding of temperature-moisture processes influencing plant survival, colonization, and habitat expansion for these three invasive alien species. Furthermore, it can be more widely applied for estimating <em>TT</em> and <em>HTT</em> across different growth stages, enhancing the prediction accuracy of plant phenological development.</p></div>","PeriodicalId":38090,"journal":{"name":"Current Plant Biology","volume":"39 ","pages":"Article 100356"},"PeriodicalIF":5.4000,"publicationDate":"2024-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2214662824000380/pdfft?md5=34369970302e1e88618fe72ff3297350&pid=1-s2.0-S2214662824000380-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Triangle area model (TAM) for predicting germination: An approach to enhance hydrothermal time model applications\",\"authors\":\"Mostafa Oveisi ,&nbsp;Hassan Alizadeh ,&nbsp;Sassan A. Lorestani ,&nbsp;Aboozar Esmaili ,&nbsp;Nasrin Sadeghnejad ,&nbsp;Ramin Piri ,&nbsp;Jose L. Gonzalez-Andujar ,&nbsp;Heinz Müller-Schärer\",\"doi\":\"10.1016/j.cpb.2024.100356\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>A thorough examination of assumptions in hydrothermal time models revealed areas for enhancing model performance. We introduce the Triangle Area Model (<em>TAM</em>), which uses the area of right-angled triangles to calculate hydrothermal time for predicting population germination fractions (<em>g</em>). TAM is characterized by its depiction of triangles, considering insightful parameters such as the distance of germination temperature (<em>T</em>) to the base (<em>T</em><sub><em>b</em></sub>), optimal (<em>T</em><sub><em>o</em></sub>), and ceiling (<em>T</em><sub><em>c</em></sub>) temperatures, the range of <em>T</em><sub><em>c</em></sub> – <em>T</em><sub><em>o</em></sub>, <em>T</em><sub><em>o</em></sub> – <em>T</em><sub><em>b</em></sub>, and the germination water potential (<em>Ψ</em>), i.e. mean base water potential (<em>Ψ</em><sub><em>b(g)</em></sub>), along with potential <em>g</em> that may occur with <em>T</em> and <em>Ψ</em> combinations within <em>T</em><sub><em>c</em></sub> – <em>T</em><sub><em>b</em></sub> when <em>Ψ &gt; Ψ</em><sub><em>b(g)</em></sub>. Applied to germination data from <em>Ambrosia psilostachya</em> L., <em>Cynanchum acutum</em> L., and <em>Bidens pilosa</em> L., <em>TAM</em> achieves an <em>RMSE</em> of 0.03 for <em>A. psilostachya</em> and <em>C. acutum</em>, and 0.05 for <em>B. pilosa</em>. Moreover, <em>TAM</em> demonstrates an <em>R</em><sup><em>2</em></sup> of 0.96, 0.97, and 0.98 for the respective species. <em>TAM</em> significantly outperforms earlier models through a comparison with varying <em>T</em> and <em>Ψ</em>. <em>TAM</em> determined <em>T</em><sub><em>b</em></sub> for <em>A. psilostachya</em>, <em>C. acutum</em>, and <em>B. pilosa</em> as 0.19, 14.57, and 5.76 <em>°C</em>; <em>T</em><sub><em>o</em></sub> as 25.1, 39.9, and 29.8 <em>°C</em>; and <em>T</em><sub><em>c</em></sub> as 46.7, 53, and 41<em>°C</em>, for the respective species. It also estimates <em>Ψ</em><sub><em>b(g)</em></sub> as -1<em>.</em>48 for <em>A. psilostachya</em>, -0.98 for <em>C. acutum</em>, and -0.97 for <em>B. pilosa</em>. The <em>TAM</em> approach deepens our understanding of temperature-moisture processes influencing plant survival, colonization, and habitat expansion for these three invasive alien species. Furthermore, it can be more widely applied for estimating <em>TT</em> and <em>HTT</em> across different growth stages, enhancing the prediction accuracy of plant phenological development.</p></div>\",\"PeriodicalId\":38090,\"journal\":{\"name\":\"Current Plant Biology\",\"volume\":\"39 \",\"pages\":\"Article 100356\"},\"PeriodicalIF\":5.4000,\"publicationDate\":\"2024-05-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2214662824000380/pdfft?md5=34369970302e1e88618fe72ff3297350&pid=1-s2.0-S2214662824000380-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Current Plant Biology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2214662824000380\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current Plant Biology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2214662824000380","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0

摘要

对水热时间模型假设的全面研究揭示了可提高模型性能的领域。我们引入了三角形面积模型(TAM),该模型利用直角三角形的面积来计算水热时间,从而预测种群发芽率(g)。三角形面积模型的特点是对三角形的描述,并考虑了一些有洞察力的参数,如发芽温度(T)到基底温度(Tb)、最佳温度(To)和最高温度(Tc)的距离,Tc - To、To - Tb 的范围,以及发芽水势(Ψ),即平均基底水势(Ψ)。即平均基本水势 (Ψb(g)),以及 Tc - Tb 范围内 T 和 Ψ 组合可能出现的水势 g(当 Ψ > Ψb(g)时)。将 TAM 应用于 Ambrosia psilostachya L.、Cynanchum acutum L. 和 Bidens pilosa L. 的发芽数据,A. psilostachya 和 C. acutum 的 RMSE 为 0.03,B. pilosa 为 0.05。此外,TAM 对相应物种的 R2 分别为 0.96、0.97 和 0.98。通过比较不同的 T 和 Ψ,TAM 明显优于早期的模型。TAM 确定了 A. psilostachya、C. acutum 和 B. pilosa 的 Tb 为 0.19、14.57 和 5.76 °C;To 为 25.1、39.9 和 29.8 °C;Tc 为 46.7、53 和 41 °C。它还估计 A. psilostachya 的 Ψb(g) 为-1.48,C. acutum 为-0.98,B. pilosa 为-0.97。TAM方法加深了我们对影响这三种外来入侵物种的植物生存、定殖和栖息地扩展的温度-水分过程的理解。此外,它还可以更广泛地应用于估算不同生长阶段的温度-湿度和 HTT,从而提高植物物候发展的预测准确性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Triangle area model (TAM) for predicting germination: An approach to enhance hydrothermal time model applications

A thorough examination of assumptions in hydrothermal time models revealed areas for enhancing model performance. We introduce the Triangle Area Model (TAM), which uses the area of right-angled triangles to calculate hydrothermal time for predicting population germination fractions (g). TAM is characterized by its depiction of triangles, considering insightful parameters such as the distance of germination temperature (T) to the base (Tb), optimal (To), and ceiling (Tc) temperatures, the range of TcTo, ToTb, and the germination water potential (Ψ), i.e. mean base water potential (Ψb(g)), along with potential g that may occur with T and Ψ combinations within TcTb when Ψ > Ψb(g). Applied to germination data from Ambrosia psilostachya L., Cynanchum acutum L., and Bidens pilosa L., TAM achieves an RMSE of 0.03 for A. psilostachya and C. acutum, and 0.05 for B. pilosa. Moreover, TAM demonstrates an R2 of 0.96, 0.97, and 0.98 for the respective species. TAM significantly outperforms earlier models through a comparison with varying T and Ψ. TAM determined Tb for A. psilostachya, C. acutum, and B. pilosa as 0.19, 14.57, and 5.76 °C; To as 25.1, 39.9, and 29.8 °C; and Tc as 46.7, 53, and 41°C, for the respective species. It also estimates Ψb(g) as -1.48 for A. psilostachya, -0.98 for C. acutum, and -0.97 for B. pilosa. The TAM approach deepens our understanding of temperature-moisture processes influencing plant survival, colonization, and habitat expansion for these three invasive alien species. Furthermore, it can be more widely applied for estimating TT and HTT across different growth stages, enhancing the prediction accuracy of plant phenological development.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Current Plant Biology
Current Plant Biology Agricultural and Biological Sciences-Plant Science
CiteScore
10.90
自引率
1.90%
发文量
32
审稿时长
50 days
期刊介绍: Current Plant Biology aims to acknowledge and encourage interdisciplinary research in fundamental plant sciences with scope to address crop improvement, biodiversity, nutrition and human health. It publishes review articles, original research papers, method papers and short articles in plant research fields, such as systems biology, cell biology, genetics, epigenetics, mathematical modeling, signal transduction, plant-microbe interactions, synthetic biology, developmental biology, biochemistry, molecular biology, physiology, biotechnologies, bioinformatics and plant genomic resources.
期刊最新文献
Integrated transcriptomic and metabolomic analysis reveals the effects of forchlorfenuron and thidiazuron on flavonoid biosynthesis in table grape skins Transcriptome signature for multiple biotic and abiotic stress in barley (Hordeum vulgare L.) identifies using machine learning approach Long non-coding RNAs: A promising tool to improve horticultural quality traits The dwarf & pale leaf mutation reduces chloroplast numbers, resulting in sugar depletion that inhibits leaf growth of maize seedlings Unlocking the biochemical and computational parameters of Ceropegia foetida: A scientific approach for functional bioactive compounds from a medicinal food plant
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1