胰岛素信号传导反应网络的比较

Patrick Vincent N. Lubenia, Eduardo R. Mendoza, Angelyn R. Lao
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引用次数: 0

摘要

了解胰岛素信号级联有助于深入了解胰岛素抵抗、糖尿病、阿尔茨海默病和癌症等生物现象的基本机制。因此,之前的研究利用化学反应网络理论对健康细胞(INSMS:INSulin MetabolicSignaling)和糖尿病细胞(INRES:INsulin RESistance)中的胰岛素信号转导反应网络进行了比较分析。本研究使用各种方法扩展了这些分析,进一步揭示了胰岛素信号传导。通过使用嵌入式网络,我们讨论了 INSMS 和 INRES 信号转导过程中存在结构性 "分叉 "的证据。INSMS 和 INRES 的一致性曲线表明,二者都有很高的保持单稳态的倾向。此外,一致性特性使我们能够提出启发式证据,证明 INRES 在单稳态之外还有更高水平的稳定性。最后,我们讨论了一种通过网络翻译分析反应网络的新方法。这种方法产生了三个新观点:(i) INSMS 和 INRES 的每个计量类都包含一个唯一的正平衡;(ii) INSMS 的任何正平衡都是指数稳定的,并且是其计量类中的全局吸引子;(iii) INRES 的任何正平衡都是局部渐近稳定的。这些结果为更好地理解胰岛素信号提供了与实验生物学家合作的机会。
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Comparison of reaction networks of insulin signaling
Understanding the insulin signaling cascade provides insights on the underlying mechanisms of biological phenomena such as insulin resistance, diabetes, Alzheimer's disease, and cancer. For this reason, previous studies utilized chemical reaction network theory to perform comparative analyses of reaction networks of insulin signaling in healthy (INSMS: INSulin Metabolic Signaling) and diabetic cells (INRES: INsulin RESistance). This study extends these analyses using various methods which give further insights regarding insulin signaling. Using embedded networks, we discuss evidence of the presence of a structural "bifurcation" in the signaling process between INSMS and INRES. Concordance profiles of INSMS and INRES show that both have a high propensity to remain monostationary. Moreover, the concordance properties allow us to present heuristic evidence that INRES has a higher level of stability beyond its monostationarity. Finally, we discuss a new way of analyzing reaction networks through network translation. This method gives rise to three new insights: (i) each stoichiometric class of INSMS and INRES contains a unique positive equilibrium; (ii) any positive equilibrium of INSMS is exponentially stable and is a global attractor in its stoichiometric class; and (iii) any positive equilibrium of INRES is locally asymptotically stable. These results open up opportunities for collaboration with experimental biologists to understand insulin signaling better.
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