非模式微生物 Erwinia persicina 的高效遗传转化和自杀质粒介导的基因组编辑系统。

IF 1 Q3 BIOLOGY Bio-protocol Pub Date : 2024-03-20 DOI:10.21769/BioProtoc.4956
Tingfeng Cheng, Tongling Ge, Xinyue Zhao, Zhu Liu, Lei Zhao
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摘要

宿主欧文氏菌(Erwinia persicina)是一种革兰氏阴性细菌,会引起植物病害。最近,E. persicina BST187 因其对细菌乙酰-CoA 羧化酶的抑制作用而被证明具有广谱抗菌活性,显示出作为生物防治剂的巨大潜力。然而,由于缺乏合适的遗传操作技术,限制了它的开发和工业应用。在此,我们开发了一种高效的宿主酵母转化系统。以 pET28a 为起始载体,在强启动子 J23119 的作用下构建了红色荧光蛋白编码基因的表达盒,并将其转化到 BST187 合格细胞中验证了过表达系统。此外,还开发了自杀质粒介导的基因组编辑系统,利用重组自杀载体pKNOCK-sacB-km-lacZ,通过亲本共轭转移敲除了BST187基因组中的lacZ。因此,转化和自杀质粒介导的基因组编辑系统将极大地促进宿主噬菌体的遗传操作,推动其发展和应用。主要特点 - 我们的研究建立了一种宿主欧文氏菌的基因操纵系统,为研究非模式微生物的基因功能提供了一种多功能工具。- 完成一个染色体位点的修饰大约需要 6-10 天。
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Efficient Genetic Transformation and Suicide Plasmid-mediated Genome Editing System for Non-model Microorganism Erwinia persicina.

Erwinia persicina is a gram-negative bacterium that causes diseases in plants. Recently, E. persicina BST187 was shown to exhibit broad-spectrum antibacterial activity due to its inhibitory effects on bacterial acetyl-CoA carboxylase, demonstrating promising potential as a biological control agent. However, the lack of suitable genetic manipulation techniques limits its exploitation and industrial application. Here, we developed an efficient transformation system for E. persicina. Using pET28a as the starting vector, the expression cassette of the red fluorescent protein-encoding gene with the strong promoter J23119 was constructed and transformed into BST187 competent cells to verify the overexpression system. Moreover, suicide plasmid-mediated genome editing systems was developed, and lacZ was knocked out of BST187 genome by parental conjugation transfer using the recombinant suicide vector pKNOCK-sacB-km-lacZ. Therefore, both the transformation and suicide plasmid-mediated genome editing system will greatly facilitate genetic manipulations in E. persicina and promote its development and application. Key features • Our studies establish a genetic manipulation system for Erwinia persicina, providing a versatile tool for studying the gene function of non-model microorganisms. • Requires approximately 6-10 days to complete modification of a chromosome locus.

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