敲除Hsp70基因会显著影响黑腹果蝇的运动速度和腿部骨骼肌的基因表达。

IF 2.5 4区 生物学 Q3 CELL BIOLOGY Physiological genomics Pub Date : 2024-08-01 Epub Date: 2024-06-17 DOI:10.1152/physiolgenomics.00143.2023
Pavel A Makhnovskii, Inna V Kukushkina, Nadia S Kurochkina, Daniil V Popov
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引用次数: 0

摘要

研究人员利用敲除13个Hsp70基因中6个基因的黑腹蝇系研究了Hsp70基因的功能。也就是说,研究了敲除Hsp70基因对负地轴爬行(运动)速度和适应爬行训练(0.5-1.5小时/天,7天/周,19天)能力的影响。与w1118苍蝇相比,7天和23天大的Hsp70-苍蝇的运动速度降低了2倍,腿部骨骼肌转录组(RNA-seq)也发生了广泛的变化。为了确定与运动速度下降有关的基因的功能,对两个时间点上重叠的差异表达基因进行了分析:上调的基因编码细胞外蛋白、药物代谢调节因子和抗氧化反应,而下调的基因编码碳水化合物代谢调节因子和跨膜蛋白。此外,利用位置权重矩阵法预测了Hsp70-苍蝇中与纤维结构破坏和热休克反应(Hsf)有关的转录因子的激活情况。在对照组苍蝇中,对慢性运动训练的适应主要与基因对单次运动的反应有关,而预测的转录因子则与应激/免疫(Hsf、NF-kB 等)和早期基因反应有关。与此相反,Hsp70-苍蝇没有表现出对训练的适应性,而且对单次运动的基因反应明显减弱。总之,敲除Hsp70基因不仅会降低体能表现,还会破坏对慢性体能训练的适应,这与腿部骨骼肌转录组的变化和对单次运动的基因反应受损有关。
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Knockout of Hsp70 genes significantly affects locomotion speed and gene expression in leg skeletal muscles of Drosophila melanogaster.

The functions of the heat shock protein 70 (Hsp70) genes were studied using a line of Drosophila melanogaster with a knockout of 6 of these genes out of 13. Namely, the effect of knockout of Hsp70 genes on negative geotaxis climbing (locomotor) speed and the ability to adapt to climbing training (0.5-1.5 h/day, 7 days/wk, 19 days) were examined. Seven- and 23-day-old Hsp70- flies demonstrated a comparable reduction (twofold) in locomotor speed and widespread changes in leg skeletal muscle transcriptome (RNA sequencing) compared with w1118 flies. To identify the functions of genes related to decreased locomotor speed, the overlapped differentially expressed genes at both time points were analyzed: the upregulated genes encoded extracellular proteins, regulators of drug metabolism, and the antioxidant response, whereas downregulated genes encoded regulators of carbohydrate metabolism and transmembrane proteins. In addition, in Hsp70- flies, activation of transcription factors related to disruption of the fibril structure and heat shock response (Hsf) was predicted, using the position weight matrix approach. In control flies, adaptation to chronic exercise training was associated mainly with gene response to a single exercise bout, whereas the predicted transcription factors were related to stress/immune (Hsf, NF-κB, etc.) and early gene response. In contrast, Hsp70- flies demonstrated no adaptation to training as well as a significantly impaired gene response to a single exercise bout. In conclusion, the knockout of Hsp70 genes not only reduced physical performance but also disrupted adaptation to chronic physical training, which is associated with changes in the leg skeletal muscle transcriptome and impaired gene response to a single exercise bout.NEW & NOTEWORTHY Knockout of six heat shock protein 70 (Hsp70) genes in Drosophila melanogaster reduced locomotion (climbing) speed that is associated with genotype-specific differences in leg skeletal muscle gene expression. Disrupted adaptation of Hsp70- flies to chronic exercise training is associated with impaired gene response to a single exercise bout.

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来源期刊
Physiological genomics
Physiological genomics 生物-生理学
CiteScore
6.10
自引率
0.00%
发文量
46
审稿时长
4-8 weeks
期刊介绍: The Physiological Genomics publishes original papers, reviews and rapid reports in a wide area of research focused on uncovering the links between genes and physiology at all levels of biological organization. Articles on topics ranging from single genes to the whole genome and their links to the physiology of humans, any model organism, organ, tissue or cell are welcome. Areas of interest include complex polygenic traits preferably of importance to human health and gene-function relationships of disease processes. Specifically, the Journal has dedicated Sections focused on genome-wide association studies (GWAS) to function, cardiovascular, renal, metabolic and neurological systems, exercise physiology, pharmacogenomics, clinical, translational and genomics for precision medicine, comparative and statistical genomics and databases. For further details on research themes covered within these Sections, please refer to the descriptions given under each Section.
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