{"title":"淀粉芽孢杆菌 fmbJ 高效合成杆菌霉素 D 的策略","authors":"Ziyan Lv , Ruili Li , Changzheng Shi, Zhaoxin Lu, Fanqiang Meng, Xiaomei Bie","doi":"10.1016/j.procbio.2024.06.026","DOIUrl":null,"url":null,"abstract":"<div><p>The cyclic lipopeptide bacillomycin D exhibits potent antifungal activity against a wide range of fungi, particularly filamentous fungi, thereby exhibiting significant potential for application in food preservation. However, the limited yield obtained from wild strains hinders the practical application of bacillomycin D. In this study, we used different strategies to modify the original strain <em>Bacillus amyloliquefaciens</em> fmbJ, including promoter replacement, competitive synthetic gene knockout, and overexpression of the lipopeptide transporter gene. Subsequently, we analyzed changes in the production and expression of bacillomycin D genes in the engineered strain. The results demonstrated that <em>P</em><sub><em>bacA</em></sub> exhibits the highest promoter activity, leading to a significant increase (2.05-fold) in bacillomycin D production compared with control group. Additionally, deletion of the <em>epsA-</em>O gene cluster also significantly enhances the synthesis of bacillomycin D. However, when amyloid gene cluster t<em>asA-sipW-yqxM</em> was deleted,bacillomycin D accumulation time was shortened, resulting in no significant increase in bacillomycin D production. In addition, lipopeptide transporters SwrC, KrsE and YcxA did not promote bacillomycin D production. Finally, by replacing the promoter P<sub><em>bacA</em></sub>, we successfully disrupted the <em>epsA</em>-O gene cluster, and bacillomycin D production increased by 2.55 times compared to the initial bacillomycin D strain. In conclusion, this study indicated that genetic engineering of regulatory genes was an effective strategy to improve the yields of bacillomycin D and provided promising strains for industrial production of bacillomycin D.</p></div>","PeriodicalId":20811,"journal":{"name":"Process Biochemistry","volume":null,"pages":null},"PeriodicalIF":3.7000,"publicationDate":"2024-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"The efficient synthesis strategy of bacillomycin D in Bacillus amyloliquefaciens fmbJ\",\"authors\":\"Ziyan Lv , Ruili Li , Changzheng Shi, Zhaoxin Lu, Fanqiang Meng, Xiaomei Bie\",\"doi\":\"10.1016/j.procbio.2024.06.026\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The cyclic lipopeptide bacillomycin D exhibits potent antifungal activity against a wide range of fungi, particularly filamentous fungi, thereby exhibiting significant potential for application in food preservation. However, the limited yield obtained from wild strains hinders the practical application of bacillomycin D. In this study, we used different strategies to modify the original strain <em>Bacillus amyloliquefaciens</em> fmbJ, including promoter replacement, competitive synthetic gene knockout, and overexpression of the lipopeptide transporter gene. Subsequently, we analyzed changes in the production and expression of bacillomycin D genes in the engineered strain. The results demonstrated that <em>P</em><sub><em>bacA</em></sub> exhibits the highest promoter activity, leading to a significant increase (2.05-fold) in bacillomycin D production compared with control group. Additionally, deletion of the <em>epsA-</em>O gene cluster also significantly enhances the synthesis of bacillomycin D. However, when amyloid gene cluster t<em>asA-sipW-yqxM</em> was deleted,bacillomycin D accumulation time was shortened, resulting in no significant increase in bacillomycin D production. In addition, lipopeptide transporters SwrC, KrsE and YcxA did not promote bacillomycin D production. Finally, by replacing the promoter P<sub><em>bacA</em></sub>, we successfully disrupted the <em>epsA</em>-O gene cluster, and bacillomycin D production increased by 2.55 times compared to the initial bacillomycin D strain. In conclusion, this study indicated that genetic engineering of regulatory genes was an effective strategy to improve the yields of bacillomycin D and provided promising strains for industrial production of bacillomycin D.</p></div>\",\"PeriodicalId\":20811,\"journal\":{\"name\":\"Process Biochemistry\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.7000,\"publicationDate\":\"2024-06-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Process Biochemistry\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1359511324002113\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOCHEMISTRY & MOLECULAR BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Process Biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1359511324002113","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
环状脂肽杆菌霉素 D 对多种真菌,尤其是丝状真菌具有很强的抗真菌活性,因此在食品保鲜方面具有很大的应用潜力。在本研究中,我们采用不同的策略对原始菌株淀粉芽孢杆菌 fmbJ 进行了改造,包括启动子替换、竞争性合成基因敲除和脂肽转运体基因的过度表达。随后,我们分析了工程菌株中杆菌霉素 D 基因的产生和表达变化。结果表明,PbacA 的启动子活性最高,与对照组相比,杆菌霉素 D 的产量显著增加(2.05 倍)。然而,当删除淀粉样蛋白基因簇 tasA-sipW-yqxM 时,杆菌霉素 D 的积累时间缩短,但杆菌霉素 D 的产量没有显著增加。此外,脂肽转运体 SwrC、KrsE 和 YcxA 也没有促进杆菌霉素 D 的产生。最后,通过替换启动子 PbacA,我们成功地破坏了 epsA-O 基因簇,与最初的杆菌霉素 D 菌株相比,杆菌霉素 D 的产量增加了 2.55 倍。总之,本研究表明,调控基因的基因工程是提高杆菌霉素 D 产量的有效策略,并为杆菌霉素 D 的工业化生产提供了前景广阔的菌株。
The efficient synthesis strategy of bacillomycin D in Bacillus amyloliquefaciens fmbJ
The cyclic lipopeptide bacillomycin D exhibits potent antifungal activity against a wide range of fungi, particularly filamentous fungi, thereby exhibiting significant potential for application in food preservation. However, the limited yield obtained from wild strains hinders the practical application of bacillomycin D. In this study, we used different strategies to modify the original strain Bacillus amyloliquefaciens fmbJ, including promoter replacement, competitive synthetic gene knockout, and overexpression of the lipopeptide transporter gene. Subsequently, we analyzed changes in the production and expression of bacillomycin D genes in the engineered strain. The results demonstrated that PbacA exhibits the highest promoter activity, leading to a significant increase (2.05-fold) in bacillomycin D production compared with control group. Additionally, deletion of the epsA-O gene cluster also significantly enhances the synthesis of bacillomycin D. However, when amyloid gene cluster tasA-sipW-yqxM was deleted,bacillomycin D accumulation time was shortened, resulting in no significant increase in bacillomycin D production. In addition, lipopeptide transporters SwrC, KrsE and YcxA did not promote bacillomycin D production. Finally, by replacing the promoter PbacA, we successfully disrupted the epsA-O gene cluster, and bacillomycin D production increased by 2.55 times compared to the initial bacillomycin D strain. In conclusion, this study indicated that genetic engineering of regulatory genes was an effective strategy to improve the yields of bacillomycin D and provided promising strains for industrial production of bacillomycin D.
期刊介绍:
Process Biochemistry is an application-orientated research journal devoted to reporting advances with originality and novelty, in the science and technology of the processes involving bioactive molecules and living organisms. These processes concern the production of useful metabolites or materials, or the removal of toxic compounds using tools and methods of current biology and engineering. Its main areas of interest include novel bioprocesses and enabling technologies (such as nanobiotechnology, tissue engineering, directed evolution, metabolic engineering, systems biology, and synthetic biology) applicable in food (nutraceutical), healthcare (medical, pharmaceutical, cosmetic), energy (biofuels), environmental, and biorefinery industries and their underlying biological and engineering principles.