山茱萸(Cornus mas L.)基因型的分子特征描述

IF 2.2 4区 农林科学 Q2 HORTICULTURE Folia Horticulturae Pub Date : 2024-07-04 DOI:10.2478/fhort-2024-0013
Azra Skender, Gordana Ðurić, Amine Assouguem, Sezai Ercisli, Gulce Ilhan, Rachid Lahlali, Riaz Ullah, Zafar Iqbal, Ahmed Bari
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引用次数: 0

摘要

微卫星简单序列重复(SSR)标记的应用已被证明在从遗传学角度确定各种水果物种的原产地特征方面非常有效。波斯尼亚和黑塞哥维那拥有丰富的山茱萸(Cornus mas L.)种质资源。本研究侧重于波斯尼亚和黑塞哥维那地理位置遥远的三个地区--德尔瓦尔、莫斯塔尔和泽尼察--包括 60 个山茱萸樱桃基因型样本。山茱萸樱桃的遗传分析使用了 8 个微卫星引物来描述 60 个基因型的遗传组成特征。值得注意的是,三个种群中所有观察到的位点都显示出 100%的多态性。总遗传差异为 0.042,分子方差分析(AMOVA)也证实了这一点,表明总遗传变异的 3%发生在群体之间,8%发生在个体之间,89%发生在个体内部。成对 Fst 分析(pFst)结果表明,莫斯塔尔和泽尼察种群之间(0.037)、德瓦尔和泽尼察之间(0.026)以及德瓦尔和莫斯塔尔之间(0.025)的差异最大。内氏遗传距离的结果证实了这些结果。此外,莫斯塔尔和泽尼察之间的差异最大(0.316),然后是德瓦尔和泽尼察之间的差异(0.285),德瓦尔和莫斯塔尔之间的差异最小(0.251)。这项研究有助于深入了解波斯尼亚和黑塞哥维那不同地区山茱萸种群的遗传多样性和特征。
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Molecular characterisation of cornelian cherry (Cornus mas L.) genotypes
The application of microsatellite simple sequence repeat (SSR) markers has proven to be highly effective in genetically characterising the origins of various fruit species. Bosnia and Herzegovina boast abundant cornelian cherry (Cornus mas L.) germplasm within its natural habitats. This study focuses on three geographically distant regions in Bosnia and Herzegovina–Drvar, Mostar and Zenica–comprising a sample of 60 cornelian cherry genotypes. The genetic analysis of cornelian cherry utilised eight microsatellite primers to characterise the genetic makeup of the 60 genotypes. Notably, all observed loci in the three populations demonstrated 100% polymorphism. The total genetic differentiation is 0.042, which is also confirmed by the analysis of molecular variance (AMOVA), which indicates that 3% of the total genetic variation is between groups, 8% between individuals and 89% within individuals. The results of pairwise Fst analysis (pFst) indicate that the greatest differentiation is between the populations of Mostar and Zenica (0.037), between Drvar and Zenica (0.026) and between Drvar and Mostar (0.025). The results of the genetic distance according to Nei confirm these results. Also, the largest difference was observed between the populations of Mostar and Zenica (0.316), then between Drvar and Zenica (0.285), and the smallest between Drvar and Mostar (0.251). This research contributes valuable insights into the genetic diversity and characterisation of cornelian cherry populations in different regions of Bosnia and Herzegovina.
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来源期刊
Folia Horticulturae
Folia Horticulturae Agricultural and Biological Sciences-Horticulture
CiteScore
3.40
自引率
0.00%
发文量
13
审稿时长
16 weeks
期刊介绍: Folia Horticulturae is an international, scientific journal published in English. It covers a broad research spectrum of aspects related to horticultural science that are of interest to a wide scientific community and have an impact on progress in both basic and applied research carried out with the use of horticultural crops and their products. The journal’s aim is to disseminate recent findings and serve as a forum for presenting views as well as for discussing important problems and prospects of modern horticulture, particularly in relation to sustainable production of high yield and quality of horticultural products, including their impact on human health.
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