从感染了3D7型尾孢疟原虫的红细胞进行胞外蛋白质组分析有望发现生物标记物

The protein journal Pub Date : 2024-08-01 Epub Date: 2024-07-15 DOI:10.1007/s10930-024-10212-1
Urja Joshi, Maulik Pandya, Sharad Gupta, Linz-Buoy George, Hyacinth Highland
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摘要

恶性疟原虫(P. falciparum)是导致最严重疟疾的病原体,如果不及时治疗,24 小时内就会导致重病甚至死亡。这项研究的目的是通过结合高精度和高灵敏度的蛋白质鉴定技术,尽可能建立最全面、信息量最大的分泌物蛋白质组。在这项研究中,我们以恶性疟原虫3D7(Pf3D7)为模型寄生虫,开发了一种无标记定量蛋白质组学策略,主要目的是鉴定体外研究过程中培养基废液中应分泌到感染红细胞外的Pf3D7蛋白质。用过的培养基上清液经过差速和超速离心步骤,然后进行总蛋白提取、估算和使用胰蛋白酶进行溶液消化。使用 Maxquant 软件(v2.1.4.0.)处理 MS/MS 图谱。用培养基上清液培养的未感染红细胞作为对照。在发现的 38 个蛋白质中,属于恶性疟原虫属的蛋白质有 EGF 样蛋白(C类蛋白(C0H544)、内质网伴侣蛋白 GRP170(C0H5H0)、小 GTP 结合蛋白 sar1(Q8I1S0)、红细胞膜蛋白 1 PfEMP1(Q8I639)、醛还原酶(Q8ID61)、疟原虫保守蛋白(Q8IEH3、Q8ILD1)、抗原 332、DBL 样蛋白(Q8IHN4)、Fe-S 簇组装蛋白(Q8II78),这些蛋白已被鉴定并选择作进一步深入研究。这项研究强调了疟原虫分泌蛋白在疾病进展和宿主-病原体相互作用的各个方面发挥关键作用的价值,可作为疟疾感染的诊断标志物。
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Extracellular Proteomic Profiling from the Erythrocytes Infected with Plasmodium Falciparum 3D7 Holds Promise for the Detection of Biomarkers.

Plasmodium falciparum (P. falciparum), which causes the most severe form of malaria, if left untreated, has 24 h window in which it can cause severe illness and even death. The aim of this study was to create the most comprehensive and informative secretory-proteome possible by combining high-accuracy and high-sensitivity protein identification technology. In this study, we used Plasmodium falciparum 3D7 (Pf3D7) as the model parasite to develop a label-free quantification proteomic strategy with the main goal of identifying Pf3D7 proteins that are supposed to be secreted outside the infected erythrocytes in the spent media culture during the in-vitro study. The spent culture media supernatant was subjected to differential and ultra-centrifugation steps followed by total protein extraction, estimation, and in-solution digestion using trypsin, digested peptides were analyzed using Nano-LC coupled with ESI for MS/MS. MS/MS spectra were processed using Maxquant software (v2.1.4.0.). Non-infected erythrocytes incubated spent cultured media supernatant were considered as control. Out of discovered 38 proteins, proteins belonging to P. falciparum spp. were EGF-like protein (C0H544), Endoplasmic reticulum chaperone GRP170 (C0H5H0), Small GTP-binding protein sar1 (Q8I1S0), Erythrocyte membrane protein 1, PfEMP1 (Q8I639), aldehyde reductase (Q8ID61), Conserved Plasmodium proteins (Q8IEH3, Q8ILD1), Antigen 332, DBL-like protein (Q8IHN4), Fe-S cluster assembly protein (Q8II78), identified and chosen for further in-depth investigation. This study highlights the value of secretory Plasmodium proteins play crucial roles in various aspects of the disease progression and host-pathogen interactions which can serve as diagnostic markers for malaria infection.

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