三种梅花感染性肾病毒的完整基因组序列:杏潜伏环斑病毒、桃花潜伏环斑病毒和一种来自光滑石桃(Prunus mira Koehne)的新型病毒。

IF 2.5 4区 医学 Q3 VIROLOGY Archives of Virology Pub Date : 2024-07-17 DOI:10.1007/s00705-024-06091-7
M. Khalili, T. Candresse, C. Faure, Y. Brans, A. Marais
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引用次数: 0

摘要

血清学、生物学和分子数据,特别是衣壳蛋白氨基酸序列的低水平(58.8%)相同性,表明 ALRSV 和 MLRSV 在分类学上是不同的。此外,通过对野生和观赏梅的公开 RNASeq 数据进行挖掘,从喜马拉雅山的光滑石桃(Prunus mira)数据集(SRR8369794)中发现了两个等位组,代表了一种新的 A 亚群肾脏病毒的几乎完整的基因组,并将其命名为 "Prunus miraus virus A"。
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Complete genome sequences of three Prunus-infecting nepoviruses: apricot latent ringspot virus, myrobalan latent ringspot virus, and a novel virus from smooth stone peach (Prunus mira Koehne)

The complete genome sequences of two poorly studied Prunus-infecting nepoviruses, apricot latent ringspot virus (ALRSV) and myrobalan latent ringspot virus (MLRSV) were determined, confirming that they are members of subgroup C. Serological, biological, and molecular data, in particular a low level (58.8%) of amino acid sequence identity in the coat protein, suggest that ALRSV and MLRSV should be considered taxonomically distinct. In addition, data mining of public RNASeq data from wild and ornamental Prunus identified two contigs representing the nearly complete genome of a new subgroup A nepovirus from a smooth stone peach (Prunus mira) dataset (SRR8369794) from the Himalayas, for which the name "Prunus mira virus A" is proposed.

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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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